RNA–Protein interactions for RNA: ENST00000480638.1

CALD1-219, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 560 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-219ENST00000480638 TMED9Q9BVK6 235 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 SRRQ9GZT4 340 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 IQCGQ9H095 443 aaKnown RBP1.79□□□□□ -2.12
CALD1-219ENST00000480638 ARMC7Q9H6L4 198 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 TFR2Q9UP52 801 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 PHLPP2Q6ZVD8 1323 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 SBNO1A3KN83 1393 aa1.79□□□□□ -2.12
CALD1-219ENST00000480638 IGHV3-43A0A0B4J1X8 118 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 A0A1B0GU33 70 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 K7ERS5 55 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 CSRP1P21291 193 aaKnown RBP1.78□□□□□ -2.12
CALD1-219ENST00000480638 MLF1P58340 268 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 EPGNQ6UW88 154 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 OR2W3Q7Z3T1 314 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 CYP4Z2PQ8N1L4 340 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 Q8NAQ8 132 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 OR2K2Q8NGT1 345 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 C20orf144Q9BQM9 153 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 ASB7Q9H672 318 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 C6orf50Q9HD87 102 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 INSIG2Q9Y5U4 225 aa1.78□□□□□ -2.12
CALD1-219ENST00000480638 A8MWP4 228 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 LEUTXA8MZ59 168 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 IGKV1D-33P01593 117 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 IGKV1-33P01594 117 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 IFI30P13284 250 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 TMEM241Q24JQ0 296 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 CLLU1OSQ5K130 101 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 CCNYL1Q8N7R7 359 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 UBA3Q8TBC4 463 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 NT5CQ8TCD5 201 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 OR2AG1Q9H205 316 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 RHBDD3Q9Y3P4 386 aa1.77□□□□□ -2.13
CALD1-219ENST00000480638 FAM240AA0A1B0GVK7 77 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 A0A1W2PRF3 423 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 A0A1W2PRM7 423 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 CENPXA8MT69 81 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 FFAR1O14842 300 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 RHOCP08134 193 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 CD9P21926 228 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 HTR2BP41595 481 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 PSMD4P55036 377 aaKnown RBP1.76□□□□□ -2.13
CALD1-219ENST00000480638 CLDN8P56748 225 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 GBE1Q04446 702 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 SSX1Q16384 188 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 ZNF404Q494X3 552 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 SLC35D2Q76EJ3 337 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 BBOF1Q8ND07 529 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 OR6K6Q8NGW6 343 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 METTL26Q96S19 204 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 TSNAXQ99598 290 aaKnown RBP1.76□□□□□ -2.13
CALD1-219ENST00000480638 KRTAP4-1Q9BYQ7 146 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 PORCNQ9H237 461 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 SLC7A11Q9UPY5 501 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 ZNF337Q9Y3M9 751 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 VWDEQ8N2E2 1590 aa1.76□□□□□ -2.13
CALD1-219ENST00000480638 RNF113AO15541 343 aaKnown RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 AKR7A2O43488 359 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 SLC37A4O43826 429 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 TRAPPC6AO75865 159 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 IGKV1-16P04430 117 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 OR5AL1P0C617 328 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 MLNP12872 115 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 TUBG1P23258 451 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 IMPA1P29218 277 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 TOMM34Q15785 309 aaPredicted RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 PCOTHQ58A44 107 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 SETD3Q86TU7 594 aaPredicted RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 TCP10LQ8TDR4 215 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 C2orf15Q8WU43 125 aaKnown RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 APOBEC3DQ96AK3 386 aaPredicted RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 RAD51AP1Q96B01 352 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 TSGA10Q9BZW7 698 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 GABARAPL1Q9H0R8 117 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 RHOFQ9HBH0 211 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 TUBG2Q9NRH3 451 aa1.75□□□□□ -2.13
CALD1-219ENST00000480638 ZNF706Q9Y5V0 76 aaPredicted RBP1.75□□□□□ -2.13
CALD1-219ENST00000480638 MIA3Q5JRA6 1907 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 F5H5P2 479 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 H3BMM0 161 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 GZMAP12544 262 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 CSKP41240 450 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 SLC35B1P78383 322 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 DEFB103AP81534 67 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 FAM27D1Q5T7N8 215 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 PIP5KL1Q5T9C9 394 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 TFGQ92734 400 aaPredicted RBP1.74□□□□□ -2.13
CALD1-219ENST00000480638 UBE2WQ96B02 151 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 COA1Q9GZY4 146 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 TMEM106BQ9NUM4 274 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 DDIT4Q9NX09 232 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 CFL2Q9Y281 166 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 FADS3Q9Y5Q0 445 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 U3KQK5 164 aa1.74□□□□□ -2.13
CALD1-219ENST00000480638 LOC389332A0A1B0GUA5 103 aa1.73□□□□□ -2.13
CALD1-219ENST00000480638 G3V3Q6 166 aa1.73□□□□□ -2.13
CALD1-219ENST00000480638 PSIP1O75475 530 aaKnown RBP1.73□□□□□ -2.13
CALD1-219ENST00000480638 CGB3P0DN86 165 aa1.73□□□□□ -2.13
CALD1-219ENST00000480638 CGB7P0DN87 165 aa1.73□□□□□ -2.13
CALD1-219ENST00000480638 DAOAP59103 153 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms