RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 CEP19Q96LK0 163 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 CCL13Q99616 98 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 PKIBQ9C010 78 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 FAM192AQ9GZU8 254 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 OR51E2Q9H255 320 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 ZNF665Q9H7R5 613 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 ELL3Q9HB65 397 aaPredicted RBP7.55□□□□□ -1.2
VCP-206ENST00000480327 LPAR2Q9HBW0 351 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 MTCH1Q9NZJ7 389 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 ING4Q9UNL4 249 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 FOXJ3Q9UPW0 622 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 POLDIP2Q9Y2S7 368 aa7.55□□□□□ -1.2
VCP-206ENST00000480327 TRAV38-1A0A0B4J264 116 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 IGKV1-12A0A0C4DH73 117 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 LOC100506127A0A0U1RQW1 187 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 A0A1B0GW55 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 TRDV1A0A1B0GX56 115 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 TRIM64CA6NLI5 447 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CEACAM18A8MTB9 384 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 B4DSR2 109 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 TRAPPC2LH3BP13 241 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 ADAM20O43506 726 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 GPX5O75715 221 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 ALX3O95076 343 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CDRT1O95170 752 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CYB5AP00167 134 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 IGKV1D-12P01611 117 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 IGHV2-5P01817 119 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 ALDOBP05062 364 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 UCHL1P09936 223 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L2P0CJ85 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L3P0CJ86 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L4P0CJ87 422 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L5P0CJ88 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L6P0CJ89 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L7P0CJ90 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 RPS2P15880 293 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 ADRA2CP18825 462 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 GADD45AP24522 165 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CFHR2P36980 270 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 GABRA2P47869 451 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CEBPDP49716 269 aaPredicted RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 SEC61A1P61619 476 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 MICBQ29980 383 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 TMEM155Q4W5P6 130 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 TEX36Q5VZQ5 186 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4L9Q6RFH8 374 aaPredicted RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 C12orf54Q6X4T0 127 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 ACP7Q6ZNF0 438 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 LRRTM1Q86UE6 522 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 MKXQ8IYA7 352 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 MUC20Q8N307 709 aaPredicted RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 SPICQ8N5J4 248 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 OR10K1Q8NGX5 313 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 ZFAND2BQ8WV99 257 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 EMG1Q92979 244 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 TMEM186Q96B77 213 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 NRIP2Q9BQI9 281 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 CHCHD6Q9BRQ6 235 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 MRPS26Q9BYN8 205 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 SLITRK2Q9H156 845 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 PATZ1Q9HBE1 687 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 SMURF1Q9HCE7 757 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 RBFOX1Q9NWB1 397 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 HIF1ANQ9NWT6 349 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 NLKQ9UBE8 527 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 IL36RNQ9UBH0 155 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 DUX4Q9UBX2 424 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 OR14J1Q9UGF5 321 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 METRNQ9UJH8 293 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 STUB1Q9UNE7 303 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 SSR3Q9UNL2 185 aa7.54□□□□□ -1.2
VCP-206ENST00000480327 AK6Q9Y3D8 172 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 PRKDCP78527 4128 aaKnown RBP7.54□□□□□ -1.2
VCP-206ENST00000480327 IGKV1D-17A0A075B6S4 117 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 A0A0A6YYJ9 748 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 SHISA3A0PJX4 238 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 SMIM30A4D0T7 59 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 OR2AT4A6NND4 320 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 NOS1APO75052 506 aaPredicted RBP7.53□□□□□ -1.2
VCP-206ENST00000480327 ARL6IP5O75915 188 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 HTR3BO95264 441 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 SFTPBP07988 381 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 MSMBP08118 114 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 WNT2P09544 360 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 PSG2P11465 335 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 SELLP14151 372 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
VCP-206ENST00000480327 PRKACAP17612 351 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 DUSP1P28562 367 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 PTGFRP43088 359 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 ZP1P60852 638 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 ERVK11-1P61568 191 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 LSM3P62310 102 aaKnown RBP7.53□□□□□ -1.2
VCP-206ENST00000480327 LCN2P80188 198 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 IKZF1Q13422 519 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 RSU1Q15404 277 aa7.53□□□□□ -1.2
VCP-206ENST00000480327 KCNJ8Q15842 424 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms