RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 AVPI1Q5T686 147 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 MKXQ8IYA7 352 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 ZNF525Q8N782 197 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 EMG1Q92979 244 aaKnown RBP5.41□□□□□ -1.54
HERC4-210ENST00000480158 YIPF5Q969M3 257 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 CEP19Q96LK0 163 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 SELENOIQ9C0D9 397 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 CXorf56Q9H5V9 222 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 NARFLQ9H6Q4 476 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 POLDIP2Q9Y2S7 368 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 UNC79Q9P2D8 2635 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 ARFGEF3Q5TH69 2177 aa5.41□□□□□ -1.54
HERC4-210ENST00000480158 TRIM64BA6NI03 449 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 HSPB6O14558 160 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 KDM4BO94953 1096 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 IGHV4-39P01824 125 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 CD55P08174 381 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 MGMTP16455 207 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 GABRR1P24046 479 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ATP5J2P56134 94 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 IL24Q13007 206 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 UNC119Q13432 240 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 RIN1Q13671 783 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 TAF9Q16594 264 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 FAM166AQ6J272 317 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 RTN4RL2Q86UN3 420 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 LAX1Q8IWV1 398 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 IZUMO1Q8IYV9 350 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 GCSAMQ8N6F7 178 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 TBC1D15Q8TC07 691 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 C1orf147Q96MC9 270 aaPredicted RBP5.4□□□□□ -1.54
HERC4-210ENST00000480158 NICN1Q9BSH3 213 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ATG5Q9H1Y0 275 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ZMAT3Q9HA38 289 aaKnown RBP5.4□□□□□ -1.54
HERC4-210ENST00000480158 TMEM106BQ9NUM4 274 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ING3Q9NXR8 418 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 RNF7Q9UBF6 113 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 DNAJB11Q9UBS4 358 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ST3GAL6Q9Y274 331 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 DSCAMO60469 2012 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ITPR2Q14571 2701 aa5.4□□□□□ -1.54
HERC4-210ENST00000480158 ISPDA4D126 451 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 LRRC30A6NM36 301 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 FAM25AB3EWG3 89 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 FAM25CB3EWG5 89 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 FAM25GB3EWG6 89 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 H7C417 338 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 OVOL3O00110 214 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 GEMIN2O14893 280 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 PPIHO43447 177 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 PTBP3O95758 552 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 ADH4P08319 380 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 GTF2F2P13984 249 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 GATA4P43694 442 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 VEGFCP49767 419 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 BIVMQ86UB2 503 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 CROCCP3Q8IVE0 287 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 FAM58AQ8N1B3 248 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 OR51T1Q8NGJ9 327 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 OR11L1Q8NGX0 322 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 AP3S1Q92572 193 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 NRIP2Q9BQI9 281 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 TMEM59Q9BXS4 323 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 KRTAP17-1Q9BYP8 105 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 PKIBQ9C010 78 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 CST11Q9H112 138 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 TLNRD1Q9H1K6 362 aa5.4□□□□□ -1.55
HERC4-210ENST00000480158 CCDC59Q9P031 241 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 MRPS7Q9Y2R9 242 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 CHD3Q12873 2000 aaKnown RBP5.4□□□□□ -1.55
HERC4-210ENST00000480158 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.39□□□□□ -1.55
HERC4-210ENST00000480158 OR7C1O76099 320 aaPredicted RBP5.39□□□□□ -1.55
HERC4-210ENST00000480158 EIF4EP06730 217 aaKnown RBP5.39□□□□□ -1.55
HERC4-210ENST00000480158 PGA5P0DJD9 388 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 CD37P11049 281 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 ELK1P19419 428 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 MPZP25189 248 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 GABRA2P47869 451 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 EFNA4P52798 201 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PRR20EP86478 221 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PRR20CP86479 221 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PRR20DP86480 221 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PRR20BP86481 221 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PRR20AP86496 221 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 MOGAT2Q3SYC2 334 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 NKAPLQ5M9Q1 402 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 CDH26Q8IXH8 852 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 CMTM4Q8IZR5 234 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 OSR2Q8N2R0 312 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PXT1Q8NFP0 134 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 KCNG3Q8TAE7 436 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 NEU4Q8WWR8 484 aaPredicted RBP5.39□□□□□ -1.55
HERC4-210ENST00000480158 SLC25A38Q96DW6 304 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 CLUHP3Q96NS8 147 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 PCDHB10Q9UN67 800 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 MEX3AA1L020 520 aaKnown RBP5.39□□□□□ -1.55
HERC4-210ENST00000480158 RFPL4AA6NLU0 287 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 RFPL4AL1F8VTS6 287 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 TMEM178BH3BS89 294 aa5.39□□□□□ -1.55
HERC4-210ENST00000480158 SIRPB1O00241 398 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms