RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 HPSE2Q8WWQ2 592 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 OR5P3Q8WZ94 311 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 RFT1Q96AA3 541 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 SPSB1Q96BD6 273 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 ITPKCQ96DU7 683 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 MEGF10Q96KG7 1140 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 PPP1R3EQ9H7J1 279 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 FN3KRPQ9HA64 309 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 UFSP2Q9NUQ7 469 aa12.09□□□□□ -0.47
USP11-207ENST00000478596 CLPSL1A2RUU4 121 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 TMEM210A6NLX4 147 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 PDCD5O14737 125 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 NDUFA7O95182 113 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 CYB5AP00167 134 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 TFAP2AP05549 437 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 UCHL1P09936 223 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 FUT6P51993 359 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 MTCP1P56278 107 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 UBE2V2Q15819 145 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 SAMD5Q5TGI4 173 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 TMEM42Q69YG0 159 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 Q6ZSR3 168 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 NKAIN3Q8N8D7 197 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 DEFB108BQ8NET1 73 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 FAM110DQ8TAY7 271 aaPredicted RBP12.08□□□□□ -0.48
USP11-207ENST00000478596 PHYHIPQ92561 330 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 YIPF6Q96EC8 236 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 KCTD7Q96MP8 289 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 SPACA5Q96QH8 159 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 TMEM138Q9NPI0 162 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 TXNL4BQ9NX01 149 aaKnown RBP12.08□□□□□ -0.48
USP11-207ENST00000478596 IL19Q9UHD0 177 aa12.08□□□□□ -0.48
USP11-207ENST00000478596 SF3B6Q9Y3B4 125 aaKnown RBP12.08□□□□□ -0.48
USP11-207ENST00000478596 TRAV8-7A0A075B6U6 113 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 CDC14BO60729 498 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 GALP22466 123 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 CD200P41217 278 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 HAAOP46952 286 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 RBP2P50120 134 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 AVPI1Q5T686 147 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 HAGHLQ6PII5 290 aaPredicted RBP12.07□□□□□ -0.48
USP11-207ENST00000478596 TMEM91Q6ZNR0 172 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 ZNF573Q86YE8 665 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 BOLLQ8N9W6 283 aaKnown RBP12.07□□□□□ -0.48
USP11-207ENST00000478596 OR5A2Q8NGI9 324 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 OR51A2Q8NGJ7 313 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 OR5D18Q8NGL1 313 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
USP11-207ENST00000478596 S100A13Q99584 98 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
USP11-207ENST00000478596 SNTG1Q9NSN8 517 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 C1orf123Q9NWV4 160 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 FOXJ3Q9UPW0 622 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 PPP1R3CQ9UQK1 317 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 COL7A1Q02388 2944 aa12.07□□□□□ -0.48
USP11-207ENST00000478596 IGHV1-69-2A0A0G2JMI3 117 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 SMIM30A4D0T7 59 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 FAM181BA6NEQ2 426 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 GPX5O75715 221 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 CD55P08174 381 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 ADH4P08319 380 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 CRYBB2P43320 205 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 GMFBP60983 142 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 RELBQ01201 579 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 HFEQ30201 348 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 GLT8D1Q68CQ7 371 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 CD200R1LQ6Q8B3 271 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 C9orf139Q6ZV77 190 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 PLGRKTQ9HBL7 147 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 POLDIP2Q9Y2S7 368 aa12.06□□□□□ -0.48
USP11-207ENST00000478596 PQLC2LA1A4F0 135 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 MEGF11A6BM72 1044 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 J3QT63 122 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 SC5DO75845 299 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 TMEM225BP0DP42 221 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 SRMP19623 302 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 FGF9P31371 208 aaPredicted RBP12.05□□□□□ -0.48
USP11-207ENST00000478596 ZNF93P35789 620 aaPredicted RBP12.05□□□□□ -0.48
USP11-207ENST00000478596 SERPINB10P48595 397 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 LCN2P80188 198 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 MXD1Q05195 221 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 ZNF154Q13106 437 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 UNQ9370/PRO34162Q6UXP9 181 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 GDPGP1Q6ZNW5 385 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 CELF2-AS1Q8N7Q2 184 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 DNAAF1Q8NEP3 725 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 TNFAIP8L1Q8WVP5 186 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 CCL17Q92583 94 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 NKX3-1Q99801 234 aaPredicted RBP12.05□□□□□ -0.48
USP11-207ENST00000478596 CENPOQ9BU64 300 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 MS4A7Q9GZW8 240 aaPredicted RBP12.05□□□□□ -0.48
USP11-207ENST00000478596 C1RLQ9NZP8 487 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 AUP1Q9Y679 476 aa12.05□□□□□ -0.48
USP11-207ENST00000478596 IGKV1-9A0A0C4DH69 117 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms