RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CTSFQ9UBX1 484 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 SNX24Q9Y343 169 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 MMACHCQ9Y4U1 282 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 RAI1Q7Z5J4 1906 aaPredicted RBP2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 HEATR5AQ86XA9 2040 aa2.69□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRRC2CQ9Y520 2896 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 IGKV3D-11A0A0A0MRZ8 115 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 KIR2DL5BA0A0G2JN68 375 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 KIR2DL5BA0A0G2JPC4 375 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SYCE1LA8MT33 242 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 VGLL3A8MV65 326 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TCP11X1B4DZS4 312 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PANO1I0J062 215 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRAF3IP2O43734 574 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 INSP01308 110 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 KRT6AP02538 564 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPINA7P05543 415 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SERPINA6P08185 405 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PABPC4LP0CB38 370 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC35E2BP0CK96 405 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SMIM10L1P0DMW3 83 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 CRISP2P16562 243 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 IL1RNP18510 177 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SLC2A5P22732 501 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 CRABP2P29373 138 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 OTX1P32242 354 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SUB1P53999 127 aaKnown RBP eCLIP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 EMP2P54851 167 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 RAB38P57729 211 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 GPX6P59796 221 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TGM3Q08188 693 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TSNQ15631 228 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 VPS26BQ4G0F5 336 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PAGE3Q5JUK9 113 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 H3F3CQ6NXT2 135 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 Q6ZSR3 168 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 NDUFAF7Q7L592 441 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 THOC6Q86W42 341 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TMEM61Q8N0U2 210 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PUSL1Q8N0Z8 303 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 KIR2DL5AQ8N109 375 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 GTPBP8Q8N3Z3 284 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZADH2Q8N4Q0 377 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 C2orf73Q8N5S3 287 aaPredicted RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 MS4A15Q8N5U1 240 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 ST6GALNAC3Q8NDV1 305 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PLPP5Q8NEB5 264 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR2G2Q8NGZ5 317 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 KIR2DL5BQ8NHK3 375 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 LZICQ8WZA0 190 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 PPP1R14BQ96C90 147 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SMIM10Q96HG1 83 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 OR4K3Q96R72 315 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 CYTH2Q99418 400 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 MS4A8Q9BY19 250 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRIM4Q9C037 500 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 SPNS1Q9H2V7 528 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDC42EP4Q9H3Q1 356 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 AGPAT4Q9NRZ5 378 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 C3orf18Q9UK00 162 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 STK38LQ9Y2H1 464 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 C15orf41Q9Y2V0 281 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 LRRC42Q9Y546 428 aa2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 CHD3Q12873 2000 aaKnown RBP2.68□□□□□ -1.98
CDC42BPA-212ENST00000478573 USP9YO00507 2555 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PKDREJQ9NTG1 2253 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRAV17A0A0B4J275 112 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 WI2-2373I1.2A0A1W2PRP0 233 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SUPT3HB4E1H0 165 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 TRIM49D1C9J1S8 452 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 C9JVG2 144 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 K7EM74 188 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PSMD12O00232 456 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 CDC7O00311 574 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 RNF13O43567 381 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 RDH16O75452 317 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SUPT3HO75486 399 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 STK16O75716 305 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 SEMA3DO95025 777 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 KLHL2O95198 593 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ATP6V1G2O95670 118 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ALDOBP05062 364 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 RPS17P08708 135 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 C1GALT1C1LP0DN25 315 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 HPGDP15428 266 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ZNF17P17021 662 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ALDH3A1P30838 453 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PLTPP55058 493 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 NAA20P61599 178 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 ELF3P78545 371 aaPredicted RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 IFT88Q13099 833 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 BIKQ13323 160 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 DYNC1I2Q13409 638 aaKnown RBP2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM83EQ2M2I3 478 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 LRRC10Q5BKY1 277 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 PRAMEF20Q5VT98 475 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 C3orf62Q6ZUJ4 267 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 CTAGE3PQ8IX95 158 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 CA13Q8N1Q1 262 aa2.67□□□□□ -1.98
CDC42BPA-212ENST00000478573 FAM71E2Q8N5Q1 922 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms