RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 ALG8Q9BVK2 526 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 ERVK13-1Q9NX77 482 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 SF3B6Q9Y3B4 125 aaKnown RBP19.14■□□□□ 0.65
C9orf3-215ENST00000478473 FAM96BQ9Y3D0 163 aa19.14■□□□□ 0.65
C9orf3-215ENST00000478473 MDKP21741 143 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-215ENST00000478473 SAA4P35542 130 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 CEBPDP49716 269 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-215ENST00000478473 CAPZA1P52907 286 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 ATP1B3P54709 279 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 DLX1P56177 255 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 SLC25A26Q70HW3 274 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 FAM185AQ8N0U4 392 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 OR4F5Q8NH21 305 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 FGGYQ96C11 551 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 AJUBAQ96IF1 538 aa19.13■□□□□ 0.65
C9orf3-215ENST00000478473 SMPD3Q9NY59 655 aaPredicted RBP19.13■□□□□ 0.65
C9orf3-215ENST00000478473 RPL36Q9Y3U8 105 aaKnown RBP19.13■□□□□ 0.65
C9orf3-215ENST00000478473 MGAM2Q2M2H8 2515 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 WBP4O75554 376 aaKnown RBP19.12■□□□□ 0.65
C9orf3-215ENST00000478473 AZGP1P25311 298 aaKnown RBP19.12■□□□□ 0.65
C9orf3-215ENST00000478473 DLX6P56179 175 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 LHFPL2Q6ZUX7 228 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 LHFPL3Q86UP9 236 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 MKXQ8IYA7 352 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 OR52I1Q8NGK6 324 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 OR10AC1Q8NH08 325 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 TAF15Q92804 592 aaKnown RBP eCLIP19.12■□□□□ 0.651e-6■■■■□ 22
C9orf3-215ENST00000478473 ZNF696Q9H7X3 374 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 AMBNQ9NP70 447 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 FGF20Q9NP95 211 aaPredicted RBP19.12■□□□□ 0.65
C9orf3-215ENST00000478473 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
C9orf3-215ENST00000478473 TRBV2A0A0J9YWF9 115 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 H0YAE9 185 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 GPR137BO60478 399 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 RBP4P02753 201 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 CRYBA1P05813 215 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 RAG2P55895 527 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 COL10A1Q03692 680 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 ZNF146Q15072 292 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 TAF9Q16594 264 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 KLHL22Q53GT1 634 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 PRR31Q5SQ13 230 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 CRIP3Q6Q6R5 217 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 BEND2Q8NDZ0 799 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 OR51A4Q8NGJ6 313 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 SLAMF9Q96A28 289 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 ISG20L2Q9H9L3 353 aaKnown RBP19.11■□□□□ 0.65
C9orf3-215ENST00000478473 BEX1Q9HBH7 125 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 OR14J1Q9UGF5 321 aa19.11■□□□□ 0.65
C9orf3-215ENST00000478473 C17orf98A8MV24 154 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 MTCP1P56278 107 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 PRB3Q04118 309 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-215ENST00000478473 PDZK1IP1Q13113 114 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 AANATQ16613 207 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 GDPGP1Q6ZNW5 385 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 OR8H2Q8N162 312 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 PARP16Q8N5Y8 322 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 SNX22Q96L94 193 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 OPALINQ96PE5 141 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 MEGF9Q9H1U4 602 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 HEXA-AS1Q9H8Q6 139 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 RHOFQ9HBH0 211 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.1■□□□□ 0.65
C9orf3-215ENST00000478473 VPREB3Q9UKI3 123 aa19.1■□□□□ 0.65
C9orf3-215ENST00000478473 hCG_1809904A0A1W2PP81 198 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 A0A1W2PPE2 198 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 A0A1W2PR64 198 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 A0A1W2PRV1 198 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 MEIOCA2RUB1 952 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 TMEM212A6NML5 194 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 ZFPL1O95159 310 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 BAG2O95816 211 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 LIMS3P0CW19 117 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 LIMS4P0CW20 117 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 ZNF20P17024 532 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 NPBWR2P48146 333 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 ZNF273Q14593 569 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 C17orf107Q6ZR85 190 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 BATF2Q8N1L9 274 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 PNKDQ8N490 385 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 PACRGLQ8N7B6 248 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 ZNF676Q8N7Q3 588 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 ZSCAN4Q8NAM6 433 aaPredicted RBP19.09■□□□□ 0.65
C9orf3-215ENST00000478473 OR5R1Q8NH85 324 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 RPS4Y2Q8TD47 263 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 STMN2Q93045 179 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 TNFRSF19Q9NS68 423 aa19.09■□□□□ 0.65
C9orf3-215ENST00000478473 TMEM82A0PJX8 343 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 CLPSL1A2RUU4 121 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 E9PI62 339 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 CYB5AP00167 134 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 CCDC159P0C7I6 412 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 OMGP23515 440 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 MEF2CQ06413 473 aaPredicted RBP19.08■□□□□ 0.64
C9orf3-215ENST00000478473 SPIN3Q5JUX0 258 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 ZNF691Q5VV52 312 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 SAXO1Q8IYX7 474 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 FAM58AQ8N1B3 248 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 ZNF555Q8NEP9 628 aa19.08■□□□□ 0.64
C9orf3-215ENST00000478473 OR4M1Q8NGD0 313 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms