RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 DEFB127Q9H1M4 99 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 LHX5Q9H2C1 402 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 RGS18Q9NS28 235 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 STOML2Q9UJZ1 356 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 ZNF223Q9UK11 482 aaPredicted RBP2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC7A11Q9UPY5 501 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 CEMIPQ8WUJ3 1361 aa2.48□□□□□ -2.01
SMARCA1-204ENST00000478420 ADAMTSL3P82987 1691 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 CAMTA1Q9Y6Y1 1673 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SNAPC4Q5SXM2 1469 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TRAV8-4A0A0B4J246 113 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 J3QT63 122 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 UGT2B11O75310 529 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 RDH16O75452 317 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC25A27O95847 323 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 P01737 135 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 PCCAP05165 728 aaPredicted RBP2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC35G6P0C7Q6 338 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 GKN3PP0CG01 181 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 HIST1H1EP10412 219 aaKnown RBP2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 CRISP2P16562 243 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 ME2P23368 584 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 F2RP25116 425 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TSPOP30536 169 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 GGT2P36268 569 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 PMELP40967 661 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 PPOXP50336 477 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 LHX2P50458 406 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 NDUFA8P51970 172 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 REG3AQ06141 175 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 BAXQ07812 192 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SHHQ15465 462 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TAF1AQ15573 450 aaPredicted RBP2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 LCE3AQ5TA76 89 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 HHATQ5VTY9 493 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TEX43Q6ZNM6 134 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TBC1D19Q8N5T2 526 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 ACBD4Q8NC06 268 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 CLDN23Q96B33 292 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TMA16Q96EY4 203 aaKnown RBP2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 RDH12Q96NR8 316 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 EBNA1BP2Q99848 306 aaKnown RBP2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 GABARAPL3Q9BY60 117 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 MS4A6AQ9H2W1 248 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 MAP1LC3AQ9H492 121 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 C12orf4Q9NQ89 552 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 C8orf4Q9NR00 106 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC2A9Q9NRM0 540 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TMEM100Q9NV29 134 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 RBM22Q9NW64 420 aaKnown RBP eCLIP2.47□□□□□ -2.016e-11■■□□□ 11.6
SMARCA1-204ENST00000478420 UVRAGQ9P2Y5 699 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 TP53TG5Q9Y2B4 290 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SLC25A15Q9Y619 301 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 ALG5Q9Y673 324 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 V9GYQ6 96 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 SCN2AQ99250 2005 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 NOTCH2Q04721 2471 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 FLT4P35916 1363 aa2.47□□□□□ -2.01
SMARCA1-204ENST00000478420 ASTN1O14525 1302 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 RIMS2Q9UQ26 1411 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 F5H5K5 113 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 KPNA3O00505 521 aaPredicted RBP2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 XKRYO14609 159 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 UBDO15205 165 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 FADS1O60427 444 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 RAD1O60671 282 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 ENTPD6O75354 484 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 FOXH1O75593 365 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 UPK1BO75841 260 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 TNFSF13O75888 250 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 GLSO94925 669 aaPredicted RBP2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 MOSP00540 346 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 GNAO1P09471 354 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 CSF3P09919 207 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 ERGP11308 486 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 MYL9P24844 172 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 CD70P32970 193 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 TGFBR2P37173 567 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 OMPP47874 163 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 CYB561P49447 251 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 NCBP2P52298 156 aaKnown RBP eCLIP2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 OR4D2P58180 307 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 MTPNP58546 118 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 RPS23P62266 143 aaKnown RBP2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 FAM3AP98173 230 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 KIAA0087Q14695 138 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 PON3Q15166 354 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 QPRTQ15274 297 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 SLC9A3R2Q15599 337 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 ALX1Q15699 326 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 TOMM34Q15785 309 aaPredicted RBP2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 SLC25A35Q3KQZ1 300 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 HACD4Q5VWC8 232 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 CST9Q5W186 159 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 KCTD16Q68DU8 428 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 XKRXQ6PP77 449 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 OAFQ86UD1 273 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 TAC4Q86UU9 113 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 GATD1Q8NB37 220 aa2.46□□□□□ -2.02
SMARCA1-204ENST00000478420 GPR32P1Q8NGA4 272 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms