RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 TTC23LQ6PF05 361 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 ANGPTL8Q6UXH0 198 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 VKORC1L1Q8N0U8 176 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 ACMSDQ8TDX5 336 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 ADTRPQ96IZ2 230 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 TIMM21Q9BVV7 248 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 TSSK6Q9BXA6 273 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 STMN4Q9H169 189 aaPredicted RBP-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 CYSTM1Q9H1C7 97 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 OR2D2Q9H210 308 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 CLN6Q9NWW5 311 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 SLC23A2Q9UGH3 650 aa-0.34□□□□□ -2.46
NCKAP1-204ENST00000477988 CACNA1EQ15878 2313 aa-0.35□□□□□ -2.46
NCKAP1-204ENST00000477988 KIAA2026Q5HYC2 2103 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 ZFYVE26Q68DK2 2539 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 MYH11P35749 1972 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 ZNF99A8MXY4 864 aaPredicted RBP-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 LINC01619G3V211 115 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 NDUFAB1O14561 156 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 LECT2O14960 151 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 HLA-AP01891 365 aaKnown RBP-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 KRTAP2-3P0C7H8 128 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 RRM2P31350 389 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 TNNT2P45379 298 aaPredicted RBP-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 OR2B6P58173 313 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 UBE2MP61081 183 aaKnown RBP-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 HOXC5Q00444 222 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 TIMM23BQ5SRD1 257 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 CYB561A3Q8NBI2 242 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 OR8A1Q8NGG7 326 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 OR4A5Q8NH83 315 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 CLDN23Q96B33 292 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 UBE2E2Q96LR5 201 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 CENPKQ9BS16 269 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 KRTAP2-4Q9BYR9 128 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 KRTAP2-1Q9BYU5 128 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 SLC7A5P2Q9GIP4 190 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 TREX1Q9NSU2 369 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 HPF1Q9NWY4 346 aa-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 NSD1Q96L73 2696 aaPredicted RBP-0.35□□□□□ -2.47
NCKAP1-204ENST00000477988 CACNA1BQ00975 2339 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 NOL3O60936 208 aaKnown RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 GUCA1CO95843 209 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 PDYNP01213 254 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 RHOCP08134 193 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 CLTAP09496 248 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 GABRA1P14867 456 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 IL9P15248 144 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 GLRA2P23416 452 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 CRABP1P29762 137 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 HTR2BP41595 481 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 HINT1P49773 126 aaPredicted RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 PMVKQ15126 192 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 PPP1R7Q15435 360 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 TAF7Q15545 349 aaPredicted RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 TRMT5Q32P41 509 aaKnown RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 FBXL19-AS1Q494R0 122 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 UNQ6190/PRO20217Q6UXQ8 127 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 RUFY3Q7L099 469 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 DPPA2Q7Z7J5 298 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 NBPF5PQ86XG9 351 aaPredicted RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 FAM58AQ8N1B3 248 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 ZNRF2Q8NHG8 242 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 HIST1H2BAQ96A08 127 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 SYAP1Q96A49 352 aaPredicted RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 CALN1Q9BXU9 219 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 PRSS16Q9NQE7 514 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 RBM22Q9NW64 420 aaKnown RBP eCLIP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 RCL1Q9Y2P8 373 aaKnown RBP-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 RTTNQ86VV8 2226 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 NCOR2Q9Y618 2525 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 CEP170Q5SW79 1584 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 FLNCQ14315 2725 aa-0.36□□□□□ -2.47
NCKAP1-204ENST00000477988 NPHP4O75161 1426 aaPredicted RBP-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 TRBV9A0A0B4J1U6 114 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 TSPAN11A1L157 253 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 NDUFS5O43920 106 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 EIF2S2P20042 333 aaKnown RBP-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 IFNAR2P48551 515 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 OR2B8PP59922 312 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 RAB10P61026 200 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 TFDP2Q14188 446 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 C10orf91Q5T1B1 145 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 SPATA8Q6RVD6 105 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 LINC00596Q86U02 117 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 UBE2J2Q8N2K1 259 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 LINC00337Q8N6G1 96 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 OR52M1Q8NGK5 317 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 OR6K6Q8NGW6 343 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 TMIGD2Q96BF3 282 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 PYURFQ96I23 114 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 SCGB3A2Q96PL1 93 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 GABRG3Q99928 467 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 UCK2Q9BZX2 261 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 ZYG11BQ9C0D3 744 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 RSPH9Q9H1X1 276 aaPredicted RBP-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 ARV1Q9H2C2 271 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 PITPNC1Q9UKF7 332 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 ASB3Q9Y575 518 aa-0.37□□□□□ -2.47
NCKAP1-204ENST00000477988 USH1CQ9Y6N9 552 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms