RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TMEM200BQ69YZ2 307 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 FIP1L1Q6UN15 594 aaKnown RBP17.79■□□□□ 0.44
COL9A3-211ENST00000477612 SLC25A26Q70HW3 274 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 Q8IYB0 196 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 FAM185AQ8N0U4 392 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 BATF2Q8N1L9 274 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF555Q8NEP9 628 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 OR10AC1Q8NH08 325 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 HAVCR2Q8TDQ0 301 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 DYRK2Q92630 601 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 SPSB1Q96BD6 273 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 FGF20Q9NP95 211 aaPredicted RBP17.79■□□□□ 0.44
COL9A3-211ENST00000477612 C8orf4Q9NR00 106 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 ZNRD1Q9P1U0 126 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 OR14J1Q9UGF5 321 aa17.79■□□□□ 0.44
COL9A3-211ENST00000477612 A0A1B0GUS0 222 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 A0A1W2PPH5 198 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 ALX3O95076 343 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 SHISA2Q6UWI4 295 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 LHFPL2Q6ZUX7 228 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 MKXQ8IYA7 352 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 OR51A4Q8NGJ6 313 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 SGMS2Q8NHU3 365 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 SLAMF9Q96A28 289 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 SF3B6Q9Y3B4 125 aaKnown RBP17.78■□□□□ 0.44
COL9A3-211ENST00000477612 FAM96BQ9Y3D0 163 aa17.78■□□□□ 0.44
COL9A3-211ENST00000477612 H0YAE9 185 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 NDUFA7O95182 113 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 IGHV4-59P01825 116 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF20P17024 532 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 COL10A1Q03692 680 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF691Q5VV52 312 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 PACRGLQ8N7B6 248 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 ZNF676Q8N7Q3 588 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 OPALINQ96PE5 141 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 SLITRK2Q9H156 845 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 DPAGT1Q9H3H5 408 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 C1RLQ9NZP8 487 aa17.77■□□□□ 0.44
COL9A3-211ENST00000477612 TRBV2A0A0J9YWF9 115 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 TMEM212A6NML5 194 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 ZFPL1O95159 310 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 LIMS3P0CW19 117 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 LIMS4P0CW20 117 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 SAA4P35542 130 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 MTCP1P56278 107 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 RELBQ01201 579 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 PRB3Q04118 309 aaPredicted RBP17.76■□□□□ 0.43
COL9A3-211ENST00000477612 PDZK1IP1Q13113 114 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 ZNF146Q15072 292 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 MIDNQ504T8 468 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 CRIP3Q6Q6R5 217 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 OR13C3Q8NGS6 347 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 TAF15Q92804 592 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL9A3-211ENST00000477612 SNX22Q96L94 193 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 TNFRSF19Q9NS68 423 aa17.76■□□□□ 0.43
COL9A3-211ENST00000477612 E9PI62 339 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 CYB5AP00167 134 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 CRYBA1P05813 215 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 CCDC159P0C7I6 412 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 MDKP21741 143 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-211ENST00000477612 NPBWR2P48146 333 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 GBX2P52951 348 aaPredicted RBP17.75■□□□□ 0.43
COL9A3-211ENST00000477612 DLX6P56179 175 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 SMN1Q16637 294 aaKnown RBP17.75■□□□□ 0.43
COL9A3-211ENST00000477612 TTC23Q5W5X9 447 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 PARP16Q8N5Y8 322 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 EMG1Q92979 244 aaKnown RBP17.75■□□□□ 0.43
COL9A3-211ENST00000477612 ZCCHC4Q9H5U6 513 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 NBEAL1Q6ZS30 2694 aa17.75■□□□□ 0.43
COL9A3-211ENST00000477612 hCG_1809904A0A1W2PP81 198 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PPE2 198 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PR64 198 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PRV1 198 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 MEIOCA2RUB1 952 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 C17orf98A8MV24 154 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 GPR137BO60478 399 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 DCKP27707 260 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 ZNF273Q14593 569 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 TAF9Q16594 264 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 C17orf107Q6ZR85 190 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 SERPINA12Q8IW75 414 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 OR8H2Q8N162 312 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 FAM58AQ8N1B3 248 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 PNKDQ8N490 385 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 ASCC1Q8N9N2 400 aaKnown RBP17.74■□□□□ 0.43
COL9A3-211ENST00000477612 BEND2Q8NDZ0 799 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 OR4M1Q8NGD0 313 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 OR4F5Q8NH21 305 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 RPS4Y2Q8TD47 263 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 AJUBAQ96IF1 538 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 MEGF9Q9H1U4 602 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 HEXA-AS1Q9H8Q6 139 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 RHOFQ9HBH0 211 aa17.74■□□□□ 0.43
COL9A3-211ENST00000477612 RBFOX1Q9NWB1 397 aaKnown RBP17.74■□□□□ 0.43
COL9A3-211ENST00000477612 TRRAPQ9Y4A5 3859 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PRD5 423 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PRF3 423 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 A0A1W2PRM7 423 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 TMEM82A0PJX8 343 aa17.73■□□□□ 0.43
COL9A3-211ENST00000477612 RBP4P02753 201 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms