RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 P2RX2Q9UBL9 471 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 UQCR10Q9UDW1 63 aa11.16□□□□□ -0.62
RTFDC1-207ENST00000477573 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 A0A087WUU8 490 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 A0A1B0GU03 582 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 BLACEA4D250 179 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 OR5B21A6NL26 309 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 METTL12A8MUP2 240 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 H0YL77 283 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 PIN1P1O15428 100 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 B3GALT2O43825 422 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 SCGB1D2O95969 90 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 AKR1C4P17516 323 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 CD38P28907 300 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 ARRB1P49407 418 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 EMP2P54851 167 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 SIRPAP78324 504 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 FCRL6Q6DN72 434 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 TMEM225Q6GV28 225 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 TOMM20LQ6UXN7 152 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 THSD4Q6ZMP0 1018 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF66Q6ZN08 573 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 CYB561A3Q8NBI2 242 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 STXBP6Q8NFX7 210 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 ZNF563Q8TA94 476 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 BAHD1Q8TBE0 780 aaPredicted RBP11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 SLC38A5Q8WUX1 472 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 AQP3Q92482 292 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 DYRK2Q92630 601 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 SDSLQ96GA7 329 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 LOXL4Q96JB6 756 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 ABHD14AQ9BUJ0 271 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 CLN8Q9UBY8 286 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 CDC42EP3Q9UKI2 254 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 PILRAQ9UKJ1 303 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 CES1P1Q9UKY3 287 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 C14orf166Q9Y224 244 aaKnown RBP11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 SPACA6W5XKT8 324 aa11.15□□□□□ -0.62
RTFDC1-207ENST00000477573 HSPB2A8KAH6 182 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 TOX4O94842 621 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CFPP27918 469 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 GUCA2AQ02747 115 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 C1orf61Q13536 156 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 ODF1Q14990 250 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 HSPB2Q16082 182 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 TPTE2P1Q5T6R2 138 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 PET117Q6UWS5 81 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CLEC18BQ6UXF7 455 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 LRRC61Q9BV99 259 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM106BQ9NUM4 274 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF736B4DX44 427 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 HMGN4O00479 90 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CYB5AP00167 134 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CELA2BP08218 269 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 SMIM10L1P0DMW3 83 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CCNOP22674 350 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 P2RY6Q15077 328 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 STPG1Q5TH74 334 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 RNF44Q7L0R7 432 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 C20orf196Q8IYI0 205 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF596Q8TC21 504 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 RHBDD1Q8TEB9 315 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 CNRIP1Q96F85 164 aaPredicted RBP11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 SMIM10Q96HG1 83 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 NMNAT2Q9BZQ4 307 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 FOXQ1Q9C009 403 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 PLEK2Q9NYT0 353 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 KIAA1456Q9P272 454 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 WIPI2Q9Y4P8 454 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 KNL1Q8NG31 2342 aa11.14□□□□□ -0.63
RTFDC1-207ENST00000477573 GON4LQ3T8J9 2241 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TRAV18A0A075B6X5 111 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TRBV2A0A0J9YWF9 115 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 B4DGG1 531 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 BIDP55957 195 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 C9orf135Q5VTT2 229 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SPEM1Q8N4L4 309 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 RAB8BQ92930 207 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM186Q96B77 213 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SMAD5Q99717 465 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CCDC3Q9BQI4 270 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SLC25A18Q9H1K4 315 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM9BQ9NQ34 198 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SLC7A7Q9UM01 511 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 MRPS16Q9Y3D3 137 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 WDR45Q9Y484 360 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TDRD6O60522 2096 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 TRIOO75962 3097 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 BORCS7-ASMTA0A0B4J1R7 106 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 H0YGG7 62 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SLC2A10O95528 541 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 IL9P15248 144 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CSRP1P21291 193 aaKnown RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CEBPDP49716 269 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms