RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 EI24O14681 340 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 TSPAN9O75954 239 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 HTR1AP08908 422 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 PIPP12273 146 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-204ENST00000477531 CCL3L1P16619 93 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 PRKACBP22694 351 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 EDDM3BP56851 147 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 PROK1P58294 105 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 SNRPGP62308 76 aaKnown RBP12.81□□□□□ -0.36
CLDN11-204ENST00000477531 KPNB1Q14974 876 aaKnown RBP12.81□□□□□ -0.36
CLDN11-204ENST00000477531 AANATQ16613 207 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 ZSCAN26Q16670 478 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 LRRC75BQ2VPJ9 315 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 ZIK1Q3SY52 487 aaPredicted RBP12.81□□□□□ -0.36
CLDN11-204ENST00000477531 SLC25A30Q5SVS4 291 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 HCP5Q6MZN7 132 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 SLC25A26Q70HW3 274 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 RDH10Q8IZV5 341 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 ACBD7Q8N6N7 88 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 DTX3Q8N9I9 347 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 DNAAF1Q8NEP3 725 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
CLDN11-204ENST00000477531 UBE2FQ969M7 185 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 MEGF9Q9H1U4 602 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 NEK6Q9HC98 313 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 MTCH1Q9NZJ7 389 aa12.81□□□□□ -0.36
CLDN11-204ENST00000477531 SLC16A6O15403 523 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 MTCP1P56278 107 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 ISL1P61371 349 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 ACTA2P62736 377 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 ACTG2P63267 376 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF273Q14593 569 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 LY6EQ16553 131 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 OCLNQ16625 522 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 OR13D1Q8NGV5 346 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 FGGYQ96C11 551 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 SNX22Q96L94 193 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 Q96MT0 163 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 GMPPBQ9Y5P6 360 aa12.8□□□□□ -0.36
CLDN11-204ENST00000477531 IGKV1-27A0A075B6S5 117 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 J3QLW9 94 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 WIPF1O43516 503 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 MPZL2O60487 215 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 RBP4P02753 201 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ISG15P05161 165 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF728P0DKX0 622 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF19P17023 458 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ATF1P18846 271 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 PEX2P28328 305 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 GABRA5P31644 462 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 POU3F4P49335 361 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 OR12D2P58182 307 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 MEF2CQ06413 473 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-204ENST00000477531 SLC35E4Q6ICL7 350 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF782Q6ZMW2 699 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-204ENST00000477531 LHFPL2Q6ZUX7 228 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 UTS2BQ765I0 119 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 OR8H2Q8N162 312 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 CBR4Q8N4T8 237 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 OR4C13Q8NGP0 309 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 PPP1R35Q8TAP8 253 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 ADAT3Q96EY9 351 aaPredicted RBP12.79□□□□□ -0.36
CLDN11-204ENST00000477531 MMP27Q9H306 513 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 FRRS1LQ9P0K9 344 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 HHLA2Q9UM44 414 aa12.79□□□□□ -0.36
CLDN11-204ENST00000477531 hADV38S2A0JD32 116 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 C17orf98A8MV24 154 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 F8VVB4 439 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 F8VWA3 439 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF737O75373 536 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 HAND1O96004 215 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 ARG1P05089 322 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 RPSAP08865 295 aaKnown RBP12.78□□□□□ -0.36
CLDN11-204ENST00000477531 GABRR1P24046 479 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 AZGP1P25311 298 aaKnown RBP12.78□□□□□ -0.36
CLDN11-204ENST00000477531 CCR9P51686 369 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 BMXP51813 675 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 KRTAP10-3P60369 221 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 EDDM3AQ14507 147 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 FDX2Q6P4F2 183 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 LIAT1Q6ZQX7 453 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 C11orf42Q8N5U0 333 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF676Q8N7Q3 588 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 OR13C3Q8NGS6 347 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 SPSB1Q96BD6 273 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 FOXRED1Q96CU9 486 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-204ENST00000477531 ZNF714Q96N38 554 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 C9orf16Q9BUW7 83 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 SEBOXQ9HB31 216 aaPredicted RBP12.78□□□□□ -0.36
CLDN11-204ENST00000477531 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 FBLN5Q9UBX5 448 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 PCDHGB5Q9Y5G0 923 aa12.78□□□□□ -0.36
CLDN11-204ENST00000477531 TRBV2A0A0J9YWF9 115 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 H3BNX3 289 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 J3QRE1 110 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 PRKACAP17612 351 aa12.77□□□□□ -0.37
CLDN11-204ENST00000477531 ALKBH1Q13686 389 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms