RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 CMSS1Q9BQ75 279 aaKnown RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 FAAP24Q9BTP7 215 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 PRDM14Q9GZV8 571 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 NECAP2Q9NVZ3 263 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 PARPBPQ9NWS1 579 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 NOSIPQ9Y314 301 aaKnown RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 IGKV1D-8A0A087WSZ0 117 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 H0YIZ8 118 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 MRPL33O75394 65 aaKnown RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 MMP7P09237 267 aaPredicted RBP14.26□□□□□ -0.13
TMEM53-208ENST00000476724 CHATP28329 748 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 UQCC3Q6UW78 93 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 DHRS11Q6UWP2 260 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 UNQ6126/PRO20091Q6UXV3 157 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 OSR2Q8N2R0 312 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 POC1AQ8NBT0 407 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 ABHD3Q8WU67 409 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 C1QTNF5Q9BXJ0 243 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 ABI3Q9P2A4 366 aa14.26□□□□□ -0.13
TMEM53-208ENST00000476724 CUL9Q8IWT3 2517 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 CEP250Q9BV73 2442 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 FAM186AA6NE01 2351 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF816-ZNF321PA0A0X1KG74 233 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 LOC105371267A0A1B0GV96 52 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 FGF16O43320 207 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 KNG1P01042 644 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 OR5H8P0DN80 308 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 PDZK1IP1Q13113 114 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 SLC38A6Q8IZM9 456 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 OR2M7Q8NG81 312 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF845Q96IR2 970 aaPredicted RBP14.25□□□□□ -0.13
TMEM53-208ENST00000476724 OR10C1Q96KK4 312 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 AK3Q9UIJ7 227 aa14.25□□□□□ -0.13
TMEM53-208ENST00000476724 RAB19A4D1S5 217 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 PMELP40967 661 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 EIF5AP63241 154 aaKnown RBP14.24□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF92Q03936 586 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 FGFBP3Q8TAT2 258 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 MARC2Q969Z3 335 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 CRYM-AS1A6NIL9 109 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 PROB1E7EW31 1015 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 TEX46H3BTG2 121 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 PTGER4P35408 488 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 PABPC1L2AQ5JQF8 200 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 ELP2Q6IA86 826 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 IGF2-ASQ6U949 168 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.24□□□□□ -0.13
TMEM53-208ENST00000476724 RNF141Q8WVD5 230 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 RRNAD1Q96FB5 475 aaKnown RBP14.24□□□□□ -0.13
TMEM53-208ENST00000476724 HDHD3Q9BSH5 251 aaPredicted RBP14.24□□□□□ -0.13
TMEM53-208ENST00000476724 LDAHQ9H6V9 325 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 CYTL1Q9NRR1 136 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 TMEM100Q9NV29 134 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 KCNIP3Q9Y2W7 256 aa14.24□□□□□ -0.13
TMEM53-208ENST00000476724 MPTX1A8MV57 137 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 NUDT19A8MXV4 375 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 TAAR5O14804 337 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 FCGR3AP08637 254 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 RAB32Q13637 225 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 TSPO2Q5TGU0 170 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 TFAP2EQ6VUC0 442 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 COLCA1Q6ZS62 124 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 PIGCQ92535 297 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF703Q9H7S9 590 aaPredicted RBP14.23□□□□□ -0.13
TMEM53-208ENST00000476724 PRR13Q9NZ81 148 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 LOC400499M0QZD8 3231 aa14.23□□□□□ -0.13
TMEM53-208ENST00000476724 ZNF850A8MQ14 1090 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 RPL36A-HNRNPH2H7BZ11 118 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 PLATP00750 562 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 IFNA21P01568 189 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 HOXB5P09067 269 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 CELA3AP09093 270 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 PLCXD3Q63HM9 321 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 OR10AD1Q8NGE0 317 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 SULT4A1Q9BR01 284 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 OR5AC2Q9NZP5 309 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 ST3GAL6Q9Y274 331 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 IGKV1-12A0A0C4DH73 117 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 SYNGR4O95473 234 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 IGKV1D-12P01611 117 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 COX5BP10606 129 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 EDN3P14138 238 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 LHX2P50458 406 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 MALLQ13021 153 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 BTN1A1Q13410 526 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 RBM39Q14498 530 aaKnown RBP14.22□□□□□ -0.13
TMEM53-208ENST00000476724 FBXL14Q8N1E6 418 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 SPERTQ8NA61 448 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 OR51F2Q8NH61 342 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 FNDC9Q8TBE3 224 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 RNF122Q9H9V4 155 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 COQ3Q9NZJ6 369 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 GSKIPQ9P0R6 139 aa14.22□□□□□ -0.13
TMEM53-208ENST00000476724 GEMIN2O14893 280 aaKnown RBP14.21□□□□□ -0.13
TMEM53-208ENST00000476724 KCNAB3O43448 404 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 PDCD6O75340 191 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 CD79AP11912 226 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 MDS2Q8NDY4 140 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 CNTNAP3BQ96NU0 1288 aa14.21□□□□□ -0.13
TMEM53-208ENST00000476724 CNTNAP3Q9BZ76 1288 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms