RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 A0A1W2PRV1 198 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 GSC2O15499 205 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 NOS1APO75052 506 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-219ENST00000476625 SRSF10O75494 262 aaKnown RBP9.51□□□□□ -0.89
HDAC6-219ENST00000476625 PRDX6P30041 224 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 DYNLT3P51808 116 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 OR2T5Q6IEZ7 315 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF454Q8N9F8 522 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 OR14K1Q8NGZ2 314 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 OR2T29Q8NH02 315 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 RBMXL1Q96E39 390 aaKnown RBP9.51□□□□□ -0.89
HDAC6-219ENST00000476625 NOL4LQ96MY1 436 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-219ENST00000476625 PRR25Q96S07 402 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 APOL4Q9BPW4 351 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 CHID1Q9BWS9 393 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 TMEM133Q9H2Q1 129 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 REEP1Q9H902 201 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 PCDHGB5Q9Y5G0 923 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 SESN1Q9Y6P5 492 aa9.51□□□□□ -0.89
HDAC6-219ENST00000476625 HUWE1Q7Z6Z7 4374 aaKnown RBP9.51□□□□□ -0.89
HDAC6-219ENST00000476625 PSPNO60542 156 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 DHRS3O75911 302 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 MPZP25189 248 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 MS4A2Q01362 244 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 TMEM42Q69YG0 159 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 GDPD3Q7L5L3 318 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 OR8H2Q8N162 312 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 OR4X2Q8NGF9 303 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 CLEC7AQ9BXN2 247 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF286AQ9HBT8 521 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 NUFIP1Q9UHK0 495 aaKnown RBP9.5□□□□□ -0.89
HDAC6-219ENST00000476625 IKZF2Q9UKS7 526 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 V9GYS6 101 aa9.5□□□□□ -0.89
HDAC6-219ENST00000476625 E9PQ18 207 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 H0YHG0 523 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 ATP8B1O43520 1251 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 PRKACGP22612 351 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 NPBWR2P48146 333 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 THBS3P49746 956 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 LUMP51884 338 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-219ENST00000476625 GRK1Q15835 563 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 CLVS2Q5SYC1 327 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 MINOS1Q5TGZ0 78 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 LCNL1Q6ZST4 164 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF573Q86YE8 665 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 DTX3Q8N9I9 347 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 ING3Q9NXR8 418 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 MINOS1-NBL1R4GNA1 71 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 U3KQK5 164 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 TENM3Q9P273 2699 aa9.49□□□□□ -0.89
HDAC6-219ENST00000476625 PRODHO43272 600 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 RBP4P02753 201 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 ALDOBP05062 364 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 BCL3P20749 454 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 AZGP1P25311 298 aaKnown RBP9.48□□□□□ -0.89
HDAC6-219ENST00000476625 HTR1DP28221 377 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 RPL23AP62750 156 aaKnown RBP9.48□□□□□ -0.89
HDAC6-219ENST00000476625 CDK5Q00535 292 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 UBE2V2Q15819 145 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 DEFB136Q30KP8 78 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 SSX6Q7RTT6 188 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 GIPC3Q8TF64 312 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 STMN2Q93045 179 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 RBM14Q96PK6 669 aaKnown RBP9.48□□□□□ -0.89
HDAC6-219ENST00000476625 LIN7BQ9HAP6 207 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 RBFOX1Q9NWB1 397 aaKnown RBP9.48□□□□□ -0.89
HDAC6-219ENST00000476625 POLDIP2Q9Y2S7 368 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 SACSQ9NZJ4 4579 aa9.48□□□□□ -0.89
HDAC6-219ENST00000476625 PSMB11A5LHX3 300 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 LINC01548A6NM66 108 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 LOC110117498-PIK3R3F6TDL0 507 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 SIRPB1O00241 398 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 OR2F2O95006 317 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
HDAC6-219ENST00000476625 DUS4LO95620 317 aaKnown RBP9.47□□□□□ -0.89
HDAC6-219ENST00000476625 HAND1O96004 215 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 IGHV3-7P01780 117 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 GABRR1P24046 479 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 OR3A1P47881 315 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 RAB25P57735 213 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 IL24Q13007 206 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 DIAPH2-AS1Q14236 149 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 BCL2L15Q5TBC7 163 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 CD300LDQ6UXZ3 194 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 SLC25A26Q70HW3 274 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 OR2W3Q7Z3T1 314 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 TRAPPC6BQ86SZ2 158 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 ZNF679Q8IYX0 411 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 ABHD12Q8N2K0 398 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 OSR2Q8N2R0 312 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 EMG1Q92979 244 aaKnown RBP9.47□□□□□ -0.89
HDAC6-219ENST00000476625 SNX22Q96L94 193 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 CEP19Q96LK0 163 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 MROQ9BYG7 248 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 PKIBQ9C010 78 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 YIPF3Q9GZM5 350 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 ACTR3BQ9P1U1 418 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 TAGLN3Q9UI15 199 aa9.47□□□□□ -0.89
HDAC6-219ENST00000476625 OR52A1Q9UKL2 312 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms