RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 POLR3KQ9Y2Y1 108 aaPredicted RBP24.61■■□□□ 1.53
HOXB3-208ENST00000476342 IGKV1D-17A0A075B6S4 117 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 MEGF11A6BM72 1044 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 RFPL4AA6NLU0 287 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 RFPL4AL1F8VTS6 287 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 ARL6IP5O75915 188 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 KNG1P01042 644 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 BCL3P20749 454 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 ZFP36P26651 326 aaKnown RBP24.61■■□□□ 1.53
HOXB3-208ENST00000476342 NPBWR2P48146 333 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 IL13RA1P78552 427 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 NEDD8Q15843 81 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 FAM27D1Q5T7N8 215 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 TMEM91Q6ZNR0 172 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 PXT1Q8NFP0 134 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 SLITRK2Q9H156 845 aa24.61■■□□□ 1.53
HOXB3-208ENST00000476342 PPIAL4CA0A0B4J2A2 164 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 IGKV1-12A0A0C4DH73 117 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 MAGEA13PA6NCF6 341 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 F8VVB4 439 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 F8VWA3 439 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 KDM4BO94953 1096 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 IGKV1D-12P01611 117 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 CDH26Q8IXH8 852 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 FAM58AQ8N1B3 248 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 FAM216BQ8N7L0 139 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 GAFA1Q96PS6 74 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 NR1H4Q96RI1 486 aaPredicted RBP24.6■■□□□ 1.53
HOXB3-208ENST00000476342 RBFOX1Q9NWB1 397 aaKnown RBP24.6■■□□□ 1.53
HOXB3-208ENST00000476342 OR14J1Q9UGF5 321 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 ZNF222Q9UK12 451 aa24.6■■□□□ 1.53
HOXB3-208ENST00000476342 KIAA1324LA8MWY0 1029 aaPredicted RBP24.59■■□□□ 1.53
HOXB3-208ENST00000476342 DVL1O14640 695 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 SIGLEC5O15389 551 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 NDUFB3O43676 98 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 SRMP19623 302 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 AMY2BP19961 511 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 FABP5Q01469 135 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 LRRC10Q5BKY1 277 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 SYT6Q5T7P8 510 aaPredicted RBP24.59■■□□□ 1.53
HOXB3-208ENST00000476342 JAGN1Q8N5M9 183 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 S100A13Q99584 98 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 ARHGAP32A7KAX9 2087 aa24.59■■□□□ 1.53
HOXB3-208ENST00000476342 NSD1Q96L73 2696 aaPredicted RBP24.58■■□□□ 1.53
HOXB3-208ENST00000476342 WNK2Q9Y3S1 2297 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 A0A0G2JMP0 313 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 A0A0X1KG70 313 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 GATA3P23771 443 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 PTGFRP43088 359 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 IKZF1Q13422 519 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 OR4M2Q8NGB6 313 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 SDSLQ96GA7 329 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 TMEM160Q9NX00 188 aa24.58■■□□□ 1.53
HOXB3-208ENST00000476342 A0A1B0GW55 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L2P0CJ85 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L3P0CJ86 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L4P0CJ87 422 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L5P0CJ88 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L6P0CJ89 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L7P0CJ90 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 PRKACAP17612 351 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 PRDX2P32119 198 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 OR3A4PP47883 348 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 BMXP51813 675 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 GP2P55259 537 aaKnown RBP24.57■■□□□ 1.52
HOXB3-208ENST00000476342 C11orf91Q3C1V1 193 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DCAF12L2Q5VW00 463 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 CD276Q5ZPR3 534 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4L9Q6RFH8 374 aaPredicted RBP24.57■■□□□ 1.52
HOXB3-208ENST00000476342 ELL3Q9HB65 397 aaPredicted RBP24.57■■□□□ 1.52
HOXB3-208ENST00000476342 DUX4Q9UBX2 424 aa24.57■■□□□ 1.52
HOXB3-208ENST00000476342 GPR37O15354 613 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 SFTPBP07988 381 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 GALP22466 123 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 RSU1Q15404 277 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 SPIN3Q5JUX0 258 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 CD200R1LQ6Q8B3 271 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 ZNF561Q8N587 486 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 ST8SIA4Q92187 359 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 PPIL3Q9H2H8 161 aaKnown RBP24.56■■□□□ 1.52
HOXB3-208ENST00000476342 HMG20AQ9NP66 347 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 GLS2Q9UI32 602 aa24.56■■□□□ 1.52
HOXB3-208ENST00000476342 SONP18583 2426 aaKnown RBP24.56■■□□□ 1.52
HOXB3-208ENST00000476342 TFF1P04155 84 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 MTNR1BP49286 362 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 CD177Q8N6Q3 437 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 MUL1Q969V5 352 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 FOXRED1Q96CU9 486 aaPredicted RBP24.55■■□□□ 1.52
HOXB3-208ENST00000476342 NKX3-1Q99801 234 aaPredicted RBP24.55■■□□□ 1.52
HOXB3-208ENST00000476342 METTL9Q9H1A3 318 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 SLC25A10Q9UBX3 287 aaPredicted RBP24.55■■□□□ 1.52
HOXB3-208ENST00000476342 MAB21L2Q9Y586 359 aa24.55■■□□□ 1.52
HOXB3-208ENST00000476342 LOC105371242A0A075B767 164 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 TRDV1A0A1B0GX56 115 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 ECDO95905 644 aaPredicted RBP24.54■■□□□ 1.52
HOXB3-208ENST00000476342 CALRP27797 417 aaKnown RBP24.54■■□□□ 1.52
HOXB3-208ENST00000476342 ZNF146Q15072 292 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 DGUOKQ16854 277 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 GLT8D1Q68CQ7 371 aa24.54■■□□□ 1.52
HOXB3-208ENST00000476342 ASCL4Q6XD76 172 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms