RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 ABCG5Q9H222 651 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 CNTD2Q9H8S5 307 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PCDHB16Q9NRJ7 776 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 TREM2Q9NZC2 230 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 EXTL2Q9UBQ6 330 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 OR5V1Q9UGF6 321 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
CPSF3-203ENST00000475482 CACNG2Q9Y698 323 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 ARHGAP32A7KAX9 2087 aa13.16□□□□□ -0.3
CPSF3-203ENST00000475482 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
CPSF3-203ENST00000475482 SCGNO76038 276 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 TPPPO94811 219 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 ELK1P19419 428 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 RAB6AP20340 208 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 HNF1AP20823 631 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 POU3F4P49335 361 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 MTCP1P56278 107 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 CLDN12P56749 244 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 PRDX4Q13162 271 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 P2RY14Q15391 338 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 HFEQ30201 348 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 C2orf76Q3KRA6 126 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 SPRNQ5BIV9 151 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 Q6ZR03 302 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 OR2W3Q7Z3T1 314 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 ANGPTL5Q86XS5 388 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 OR51D1Q8NGF3 324 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 OR5A2Q8NGI9 324 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 CMBLQ96DG6 245 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 CCDC32Q9BV29 185 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 MSL2Q9HCI7 577 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 RAB22AQ9UL26 194 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 MRPS28Q9Y2Q9 187 aaKnown RBP13.15□□□□□ -0.3
CPSF3-203ENST00000475482 RHBDD3Q9Y3P4 386 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 WIPI2Q9Y4P8 454 aa13.15□□□□□ -0.3
CPSF3-203ENST00000475482 FAM230AA0A1W2PPH8 454 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 METTL21EPA6NDL7 271 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF850A8MQ14 1090 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 IQCF6A8MYZ5 107 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 MSMBP08118 114 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 PTGFRP43088 359 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 PITPNBP48739 271 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 IL18Q14116 193 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 GPR176Q14439 515 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 CEACAM21Q3KPI0 293 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 OR2T2Q6IF00 324 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 GDPD1Q8N9F7 314 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 OR5H6Q8NGV6 325 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 KCNG3Q8TAE7 436 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 SLC25A28Q96A46 364 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM186Q96B77 213 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 EGLN1Q9GZT9 426 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 CST11Q9H112 138 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 NARFLQ9H6Q4 476 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 DIABLOQ9NR28 239 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 RHBDL2Q9NX52 303 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 FBLN5Q9UBX5 448 aa13.14□□□□□ -0.31
CPSF3-203ENST00000475482 A0A0A6YYH2 397 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 A0A0B4J203 849 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-203ENST00000475482 A6NJ64 397 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 OR5B21A6NL26 309 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 TIMM8AO60220 97 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF780AO75290 641 aaPredicted RBP13.13□□□□□ -0.31
CPSF3-203ENST00000475482 EIF4EP06730 217 aaKnown RBP13.13□□□□□ -0.31
CPSF3-203ENST00000475482 MZT1Q08AG7 82 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 AVPI1Q5T686 147 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 PYHIN1Q6K0P9 492 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 GLCCI1Q86VQ1 547 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 OR4D6Q8NGJ1 314 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 MICU1Q9BPX6 476 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 HIF1ANQ9NWT6 349 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 V9GYH0 126 aa13.13□□□□□ -0.31
CPSF3-203ENST00000475482 A0A1B0GWJ7 208 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 RNF212BA8MTL3 300 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 TPD52L2O43399 206 aaKnown RBP13.12□□□□□ -0.31
CPSF3-203ENST00000475482 CYB5AP00167 134 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 IGHV2-5P01817 119 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 TMEM225BP0DP42 221 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 PRSS12P56730 875 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 ZNF181Q2M3W8 571 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 RAB12Q6IQ22 244 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 GLIPR1L1Q6UWM5 242 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 CMTM4Q8IZR5 234 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 SPERTQ8NA61 448 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 ZSCAN4Q8NAM6 433 aaPredicted RBP13.12□□□□□ -0.31
CPSF3-203ENST00000475482 BHLHE23Q8NDY6 225 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 OR8G5Q8NG78 346 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 OR4M1Q8NGD0 313 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 OR8S1Q8NH09 359 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 CCL17Q92583 94 aa13.12□□□□□ -0.31
CPSF3-203ENST00000475482 RAB1CQ92928 201 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms