RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 C5orf66Q9H5L9 145 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 ANXA10Q9UJ72 324 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 OSGIN2Q9Y236 505 aa13.2□□□□□ -0.3
RPUSD3-215ENST00000475470 J3QW42 95 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 FCGR3AP08637 254 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 C4BPBP20851 252 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 FUT3P21217 361 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 EIF2S3P41091 472 aaKnown RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 GMFBP60983 142 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 BAMBIQ13145 260 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 AADACL3Q5VUY0 350 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 NSUN5P2Q63ZY6 315 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 DYRK2Q92630 601 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 ELMOD3Q96FG2 381 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 POM121Q96HA1 1249 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 PDCD10Q9BUL8 212 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 CLEC4MQ9H2X3 399 aaPredicted RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 TRAPPC2LH3BP13 241 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 L7N2F9 121 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 LILRA1O75019 489 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 DUS4LO95620 317 aaKnown RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 PDGFAP04085 211 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 OPRM1P35372 400 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 TEX261Q6UWH6 196 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 TMEM200AQ86VY9 491 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 TMEM185AQ8NFB2 350 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 Q8NFD4 153 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 TMA7Q9Y2S6 64 aaKnown RBP13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 U3KQ87 197 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
RPUSD3-215ENST00000475470 CFAP47Q6ZTR5 3102 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 FXYD6-FXYD2A0A087WZ82 144 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 MSTNO14793 375 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 RRP8O43159 456 aaKnown RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 PI3P19957 117 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 ELP2Q6IA86 826 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 KCTD9Q7L273 389 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 PEG10Q86TG7 708 aaKnown RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 CCDC120Q96HB5 630 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 DPCDQ9BVM2 203 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 FXYD6Q9H0Q3 95 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 HEXA-AS1Q9H8Q6 139 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 PLSCR4Q9NRQ2 329 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 DKK4Q9UBT3 224 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 LHX6Q9UPM6 363 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM221AA4D161 298 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 OR5H14A6NHG9 310 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 CCSO14618 274 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 SMPD2O60906 423 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 CXCL2P19875 107 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 COX5AP20674 150 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 CA6P23280 308 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 FGF12P61328 243 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 SEC61A1P61619 476 aaKnown RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 PPP1CBP62140 327 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 GNG3P63215 75 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 SORDQ00796 357 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 HAGHLQ6PII5 290 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF2Q9BSG1 426 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 RTBDNQ9BSG5 229 aaPredicted RBP13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 C1QTNF6Q9BXI9 259 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 CEP250Q9BV73 2442 aa13.18□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A10PA6NDY2 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A18PA6NE21 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A16PA6NEW6 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A20PA6NIJ5 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A8PA6NJQ4 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A7PA6NKC0 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 OR5B21A6NL26 309 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 HMSDA8MTL9 139 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A22PA8MWA6 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A12PA8MX19 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A5PA8MXJ8 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A23PA8MXZ1 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 MCRIP1C9JLW8 97 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 ARPC5O15511 151 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A15PP0C7V4 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A13PP0C7W8 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A14PP0C7W9 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM90A24PP0C7X0 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 PGAM2P15259 253 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 ZNF573Q86YE8 665 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 C1orf162Q8NEQ5 155 aaPredicted RBP13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 NECAP2Q9NVZ3 263 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 PROCRQ9UNN8 238 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FAM25EA8MYX2 175 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 F8VVB4 439 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 F8VWA3 439 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 M0R233 179 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 OR5H8P0DN80 308 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 CBR1P16152 277 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 PPP3CBP16298 524 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 HLA-GP17693 338 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 GLRA1P23415 457 aa13.17□□□□□ -0.3
RPUSD3-215ENST00000475470 FOXC1Q12948 553 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms