RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 MRGPRX3Q96LB0 322 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 DCAF16Q9NXF7 216 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 TMEFF2Q9UIK5 374 aaPredicted RBP9.75□□□□□ -0.85
VAPB-204ENST00000475243 TRAPPC4Q9Y296 219 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 DRD3P35462 400 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
VAPB-204ENST00000475243 TRA2AQ13595 282 aaKnown RBP eCLIP9.75□□□□□ -0.853e-6■□□□□ 11.2
VAPB-204ENST00000475243 C12orf73Q69YU5 71 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 ZNF429Q86V71 674 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 ZNF547Q8IVP9 402 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 OR5C1Q8NGR4 320 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 RNASEK-C17orf49H0YIS7 233 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 LIMS3P0CW19 117 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 LIMS4P0CW20 117 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 HIST1H1DP16402 221 aaKnown RBP9.75□□□□□ -0.85
VAPB-204ENST00000475243 ST3GAL2Q16842 350 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 ZNF425Q6IV72 752 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 OR1B1Q8NGR6 318 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 OR2A5Q96R48 311 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 WNT16Q9UBV4 365 aa9.75□□□□□ -0.85
VAPB-204ENST00000475243 SLC25A1P53007 311 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 THSD4Q6ZMP0 1018 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 TGIF2LYQ8IUE0 185 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 ZNF683Q8IZ20 524 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 TMEM37Q8WXS4 190 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 TMEM18Q96B42 140 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 VPS25Q9BRG1 176 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 C3orf85A0A1B0GTC6 90 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 SFTA3P0C7M3 94 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CTF1Q16619 201 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CYSLTR2Q9NS75 346 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 PRR13Q9NZ81 148 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CTLA4P16410 223 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CD96P40200 585 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 RPL13AP40429 203 aaKnown RBP9.74□□□□□ -0.85
VAPB-204ENST00000475243 TIAL1Q01085 375 aaKnown RBP eCLIP9.74□□□□□ -0.85
VAPB-204ENST00000475243 UQCC1Q9NVA1 299 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CACNG5Q9UF02 275 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CRYBB2P43320 205 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 GPBAR1Q8TDU6 330 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 WDR13Q9H1Z4 485 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 PLPP2O43688 288 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CCL4P13236 92 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 PRRX1P54821 245 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 PPP1R1AQ13522 171 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 UQCC2Q9BRT2 126 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 RAB1BQ9H0U4 201 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 SEBOXQ9HB31 216 aaPredicted RBP9.74□□□□□ -0.85
VAPB-204ENST00000475243 FPR2P25090 351 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 AANATQ16613 207 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 OR4F17Q8NGA8 305 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 GPR137Q96N19 417 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.74□□□□□ -0.85
VAPB-204ENST00000475243 HSBP1O75506 76 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 GALR1P47211 349 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 OR3A1P47881 315 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 NHLRC2Q8NBF2 726 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 EID2BQ96D98 161 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 AKIP1Q9NQ31 210 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 LHX9Q9NQ69 397 aa9.74□□□□□ -0.85
VAPB-204ENST00000475243 MMP7P09237 267 aaPredicted RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 G0S2P27469 103 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 MAGEA5P43359 124 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 LYZP61626 148 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 IGFBP7Q16270 282 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 TEX261Q6UWH6 196 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 GLDNQ6ZMI3 551 aaPredicted RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 U3KQ87 197 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 C9orf170A2RU37 121 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 RAB5AP20339 215 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 TPPP2P59282 170 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 HTRA4P83105 476 aaPredicted RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 SLC38A11Q08AI6 406 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 LIMS2Q7Z4I7 341 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 BMPR1BO00238 502 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 IGHA1P01876 353 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 IGHA2P01877 340 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 RNASEKQ6P5S7 137 aaKnown RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 LILRA6Q6PI73 481 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 IGLV3-16A0A075B6K0 115 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 TUSC1Q2TAM9 212 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 TSPO2Q5TGU0 170 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 LPAR2Q9HBW0 351 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 OR5V1Q9UGF6 321 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 CDX4O14627 284 aaPredicted RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 PHOX2AO14813 284 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 CTAG2O75638 210 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 RNF224P0DH78 156 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 BMI1P35226 326 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 SSBP1Q04837 148 aaKnown RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 EIF3IQ13347 325 aaKnown RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 KIAA0040Q15053 153 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 MUC20Q8N307 709 aaPredicted RBP9.73□□□□□ -0.85
VAPB-204ENST00000475243 ARRDC1Q8N5I2 433 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 KCNE1BA0A087WTH5 132 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 CDC42EP2O14613 210 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 NQO2P16083 231 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 DHRS2Q13268 280 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 GUK1Q16774 197 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 OR8B12Q8NGG6 310 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms