RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 PPP1R1AQ13522 171 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 KRTCAP3Q53RY4 240 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 MARCH1Q8TCQ1 289 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 RIMS4Q9H426 269 aaPredicted RBP18.71■□□□□ 0.59
CCM2-206ENST00000474617 ZNF286AQ9HBT8 521 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 AK3Q9UIJ7 227 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 ZNF732B4DXR9 585 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 GEMIN2O14893 280 aaKnown RBP18.7■□□□□ 0.58
CCM2-206ENST00000474617 PLATP00750 562 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 IFNA7P01567 189 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 SFTPBP07988 381 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 HAAOP46952 286 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 SEC61A1P61619 476 aaKnown RBP18.7■□□□□ 0.58
CCM2-206ENST00000474617 CALHM1Q8IU99 346 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 Q8IYB0 196 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 CNEP1R1Q8N9A8 125 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 C9orf106Q8NAJ2 232 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 LILRB4Q8NHJ6 448 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 COQ8AQ8NI60 647 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 TAAR6Q96RI8 345 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 MICU1Q9BPX6 476 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 COL25A1Q9BXS0 654 aaPredicted RBP18.7■□□□□ 0.58
CCM2-206ENST00000474617 PROCRQ9UNN8 238 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 C14orf166Q9Y224 244 aaKnown RBP18.7■□□□□ 0.58
CCM2-206ENST00000474617 SSUH2Q9Y2M2 353 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 MED12LQ86YW9 2145 aa18.7■□□□□ 0.58
CCM2-206ENST00000474617 RFPL4AA6NLU0 287 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 RFPL4AL1F8VTS6 287 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 MKRN2OSH3BPM6 223 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 FCGR3AP08637 254 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 SNRPD2P62316 118 aaKnown RBP18.69■□□□□ 0.58
CCM2-206ENST00000474617 IL13RA2Q14627 380 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 HLXQ14774 488 aaPredicted RBP18.69■□□□□ 0.58
CCM2-206ENST00000474617 TMEM65Q6PI78 240 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 BEND4Q6ZU67 534 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 RFPL4BQ6ZWI9 263 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 OR13G1Q8NGZ3 307 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 FAAP24Q9BTP7 215 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 RTL8AQ9BWD3 113 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 COMMD9Q9P000 198 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 L7N2F9 121 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 SMPD2O60906 423 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 SFT2D2O95562 160 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 IGKV3-15P01624 115 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 GPM6AP51674 278 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 AADACL3Q5VUY0 350 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 TEX261Q6UWH6 196 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 DHRS11Q6UWP2 260 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 RTN4RL2Q86UN3 420 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 GCNT2Q8N0V5 402 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 SLX1AQ9BQ83 275 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 C5orf66Q9H5L9 145 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 RCC2Q9P258 522 aaKnown RBP18.69■□□□□ 0.58
CCM2-206ENST00000474617 AMDHD2Q9Y303 409 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 U3KQ87 197 aa18.69■□□□□ 0.58
CCM2-206ENST00000474617 MUC6Q6W4X9 2439 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 DBX1A6NMT0 343 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 TOXO94900 526 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 RPA2P15927 270 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 AKR1C4P17516 323 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 PPP1CBP62140 327 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 PIGYQ3MUY2 71 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 LY6G6FQ5SQ64 297 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 ASCL5Q7RTU5 278 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 OR8H1Q8NGG4 311 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 VRK1Q99986 396 aaPredicted RBP18.68■□□□□ 0.58
CCM2-206ENST00000474617 SULT4A1Q9BR01 284 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 IFT22Q9H7X7 185 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 RAB18Q9NP72 206 aa18.68■□□□□ 0.58
CCM2-206ENST00000474617 FREM2Q5SZK8 3169 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 RIF1Q5UIP0 2472 aaKnown RBP18.67■□□□□ 0.58
CCM2-206ENST00000474617 TUBAL3A6NHL2 446 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 MCRIP1C9JLW8 97 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 CTSDP07339 412 aaPredicted RBP18.67■□□□□ 0.58
CCM2-206ENST00000474617 SLC25A4P12235 298 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 VAMP1P23763 118 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 NPY4RP50391 375 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 OR5M9Q8NGP3 310 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 FN3KRPQ9HA64 309 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 ZNF230Q9UIE0 474 aaPredicted RBP18.67■□□□□ 0.58
CCM2-206ENST00000474617 POLDIP2Q9Y2S7 368 aa18.67■□□□□ 0.58
CCM2-206ENST00000474617 LRP5LA4QPB2 252 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 TMEM210A6NLX4 147 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 J3QT63 122 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 LYZL6O75951 148 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 OR7C1O76099 320 aaPredicted RBP18.66■□□□□ 0.58
CCM2-206ENST00000474617 OR5H8P0DN80 308 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 PRSS12P56730 875 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 C2orf68Q2NKX9 166 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 C3orf36Q3SXR2 165 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 C17orf107Q6ZR85 190 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 ELMOD3Q96FG2 381 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 PDCD10Q9BUL8 212 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 ZNF442Q9H7R0 627 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 HEXA-AS1Q9H8Q6 139 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 SLC23A1Q9UHI7 598 aa18.66■□□□□ 0.58
CCM2-206ENST00000474617 FAM186AA6NE01 2351 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 IQCF6A8MYZ5 107 aa18.65■□□□□ 0.58
CCM2-206ENST00000474617 ACAA1P09110 424 aaPredicted RBP18.65■□□□□ 0.58
CCM2-206ENST00000474617 CALCRP30988 508 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 322.9 ms