RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 PRTN3P24158 256 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 DCKP27707 260 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 NPBWR2P48146 333 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 SOX2P48431 317 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 COL10A1Q03692 680 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 TUSC1Q2TAM9 212 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 C12orf54Q6X4T0 127 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 LHFPL2Q6ZUX7 228 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 Q8N7P7 452 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
ITGB1-210ENST00000474568 C8orf46Q8TAG6 207 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 TAF15Q92804 592 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITGB1-210ENST00000474568 GGHQ92820 318 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 GCDHQ92947 438 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-210ENST00000474568 EMG1Q92979 244 aaKnown RBP13.16□□□□□ -0.3
ITGB1-210ENST00000474568 OPALINQ96PE5 141 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 DCLRE1BQ9H816 532 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 RBFOX1Q9NWB1 397 aaKnown RBP13.16□□□□□ -0.3
ITGB1-210ENST00000474568 DHDHQ9UQ10 334 aa13.16□□□□□ -0.3
ITGB1-210ENST00000474568 ANK2Q01484 3957 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 IRGMA1A4Y4 181 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 HOXA3O43365 443 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 DUSP1P28562 367 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 SLC34A1Q06495 639 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 IL18R1Q13478 541 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 SLC9A3R2Q15599 337 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 LAIR2Q6ISS4 152 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 TMPRSS11AQ6ZMR5 421 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 PNKDQ8N490 385 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 ZNF561Q8N587 486 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 DNAAF1Q8NEP3 725 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 RGP1Q92546 391 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 SPSB1Q96BD6 273 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 TMEM80Q96HE8 168 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 JAM3Q9BX67 310 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 VCXQ9H320 206 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 ZCCHC4Q9H5U6 513 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 NEK6Q9HC98 313 aa13.15□□□□□ -0.3
ITGB1-210ENST00000474568 DIMT1Q9UNQ2 313 aaKnown RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 CAB39Q9Y376 341 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 EXOSC1Q9Y3B2 195 aaKnown RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 SIRT4Q9Y6E7 314 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-210ENST00000474568 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 H0YAE9 185 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 RNASEK-C17orf49H0YIS7 233 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 CYB5AP00167 134 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 LALBAP00709 142 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 HCKP08631 526 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 PRKACAP17612 351 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 CDK5R1Q15078 307 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 MKXQ8IYA7 352 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 KIR3DL3Q8N743 410 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 ZFP41Q8N8Y5 198 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 BPIFB6Q8NFQ5 453 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 NRG4Q8WWG1 115 aa13.14□□□□□ -0.31
ITGB1-210ENST00000474568 CHCHD3Q9NX63 227 aaKnown RBP13.14□□□□□ -0.31
ITGB1-210ENST00000474568 TRBV23-1A0A0A0MS06 115 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 IGKV1-12A0A0C4DH73 117 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 HAND1O96004 215 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 IGKV1D-12P01611 117 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 TK1P04183 234 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 RPL31P62899 125 aaKnown RBP13.13□□□□□ -0.31
ITGB1-210ENST00000474568 ST3GAL4Q11206 333 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 BLMHQ13867 455 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 RPL22L1Q6P5R6 122 aaKnown RBP13.13□□□□□ -0.31
ITGB1-210ENST00000474568 AHSA2Q719I0 299 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 OR13C5Q8NGS8 318 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 SLC25A28Q96A46 364 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 NKX3-1Q99801 234 aaPredicted RBP13.13□□□□□ -0.31
ITGB1-210ENST00000474568 BABAM2Q9NXR7 383 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 TAS2R4Q9NYW5 299 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 HSPE1-MOB4S4R3N1 261 aa13.13□□□□□ -0.31
ITGB1-210ENST00000474568 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 TMEM82A0PJX8 343 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 EFCAB10A6NFE3 127 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 M0R1W7 72 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 HAX1O00165 279 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 SULT1B1O43704 296 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 CHRM2P08172 466 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
ITGB1-210ENST00000474568 CCL3L1P16619 93 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 AQP4P55087 323 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 EDDM3BP56851 147 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 BPIFB3P59826 476 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 MED21Q13503 144 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 EDDM3AQ14507 147 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 ZNF273Q14593 569 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 TMEM200BQ69YZ2 307 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 SERPINA12Q8IW75 414 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 FAM58AQ8N1B3 248 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 STX19Q8N4C7 294 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 OR5D14Q8NGL3 314 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 TFAP2CQ92754 450 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 ORAI1Q96D31 301 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 CHST6Q9GZX3 395 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 GSTK1Q9Y2Q3 226 aa13.12□□□□□ -0.31
ITGB1-210ENST00000474568 TMEM89A2RUT3 159 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms