RNA–Protein interactions for RNA: ENST00000473883.5

HCLS1-205, Transcript of hematopoietic cell-specific Lyn substrate 1, human

TSL 2

Gene HCLS1, Length 2,710 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCLS1-205	ENST00000473883	EFCAB11	Q9BUY7	163 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	ABHD6	Q9BV23	337 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	RNF126	Q9BV68	326 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	SNRNP25	Q9BV90	132 aa	Known RBP	11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	MAP1LC3B	Q9GZQ8	125 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR51I2	Q9H344	312 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	B3GALT5	Q9Y2C3	310 aa		11.12	□□□□□ -0.63
HCLS1-205	ENST00000473883	MYADML2	A6NDP7	307 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	TMEM50A	O95807	157 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	NRAS	P01111	189 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	CFHR2	P36980	270 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	HLA-DRB3	P79483	266 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	HIST1H1A	Q02539	215 aa	Predicted RBP	11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	LRRC69	Q6ZNQ3	347 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR4C16	Q8NGL9	310 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	DOHH	Q9BU89	302 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	CHST6	Q9GZX3	395 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	CD5L	O43866	347 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	PRICKLE3	O43900	615 aa	Predicted RBP	11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	HLA-DQB2	P05538	268 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	DANCR	P0C864	163 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	ADH5	P11766	374 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	ATP6V0C	P27449	155 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	CDKN2A	P42771	156 aa	Known RBP	11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	RGR	P47804	291 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	CYCS	P99999	105 aa	Known RBP	11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	HLA-B	Q31612	363 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR4F17	Q8NGA8	305 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR4F4	Q96R69	305 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	ZNF670	Q9BS34	389 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	ULBP2	Q9BZM5	246 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	NMES1	Q9C002	83 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	HSF4	Q9ULV5	492 aa		11.11	□□□□□ -0.63
HCLS1-205	ENST00000473883	TRAV1-2	A0A0B4J238	106 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	SMIM9	A6NGZ8	99 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	SOX1	O00570	391 aa	Predicted RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	GUCA1A	P43080	201 aa	Predicted RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	ADAM8	P78325	824 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	MRPS34	P82930	218 aa	Known RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	FUT7	Q11130	342 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	MPV17L	Q2QL34	196 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	FOXI2	Q6ZQN5	318 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	H1FNT	Q75WM6	255 aa	Predicted RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	TMEM251	Q8N6I4	163 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	PTGR2	Q8N8N7	351 aa	Predicted RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	FGF11	Q92914	225 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	RNF125	Q96EQ8	232 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	ANKRD10	Q9NXR5	420 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883		H0YL77	283 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883		J3QR89	54 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	SRP19	P09132	144 aa	Known RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	FRK	P42685	505 aa	Predicted RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	ZNF92	Q03936	586 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	DCAF4L1	Q3SXM0	396 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	FAM174B	Q3ZCQ3	159 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	ARHGEF39	Q8N4T4	335 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	LINC00471	Q8N535	108 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	STARD4	Q96DR4	205 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	UHRF2	Q96PU4	802 aa		11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	NXF5	Q9H1B4	397 aa	Known RBP	11.1	□□□□□ -0.63
HCLS1-205	ENST00000473883	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	PGF	P49763	221 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	TAS2R50	P59544	299 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ARL9	Q6T311	187 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	C19orf35	Q6ZS72	473 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883		Q6ZSR9	355 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	FA2H	Q7L5A8	372 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ADAD2	Q8NCV1	583 aa	Known RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR13G1	Q8NGZ3	307 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	MARCH1	Q8TCQ1	289 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	SPON2	Q9BUD6	331 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	NPFFR1	Q9GZQ6	430 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	CLEC1B	Q9P126	229 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	FBLN5	Q9UBX5	448 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ICAM5	Q9UMF0	924 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	NOP16	Q9Y3C1	178 aa	Known RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	XRCC2	O43543	280 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	JTB	O76095	146 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	CGA	P01215	116 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	IFNA1	P01562	189 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	MDH2	P40926	338 aa	Known RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	UPP1	Q16831	310 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	KIAA1644	Q3SXP7	199 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	RPL7L1	Q6DKI1	246 aa	Known RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ERAS	Q7Z444	233 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ACOT1	Q86TX2	421 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	OR6N2	Q8NGY6	317 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	KCNG3	Q8TAE7	436 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	SLC25A40	Q8TBP6	338 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	RTBDN	Q9BSG5	229 aa	Predicted RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	ISG20L2	Q9H9L3	353 aa	Known RBP	11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	PLA2G3	Q9NZ20	509 aa		11.09	□□□□□ -0.63
HCLS1-205	ENST00000473883	TRAV8-6	A0A0B4J262	113 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	ANKRD30BL	A7E2S9	258 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	FOXH1	O75593	365 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	UPK3A	O75631	287 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	C1QL1	O75973	258 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	GAST	P01350	101 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	ZNF286B	P0CG31	522 aa		11.08	□□□□□ -0.64
HCLS1-205	ENST00000473883	MDK	P21741	143 aa	Predicted RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms