RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 CIB2O75838 187 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 IGHA1P01876 353 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 DUSP1P28562 367 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 TGFBR2P37173 567 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 RAB13P51153 203 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 MIDNQ504T8 468 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 OR52N4Q8NGI2 321 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 OR51A4Q8NGJ6 313 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 RNFT2Q96EX2 444 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 CEP19Q96LK0 163 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 MBOAT4Q96T53 435 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 RBFOX1Q9NWB1 397 aaKnown RBP13.52□□□□□ -0.25
USP40-212ENST00000473191 FOXJ3Q9UPW0 622 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 SLC7A11Q9UPY5 501 aa13.52□□□□□ -0.25
USP40-212ENST00000473191 C17orf98A8MV24 154 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 BCL3P20749 454 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 FUT6P51993 359 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 SNU13P55769 128 aaKnown RBP13.51□□□□□ -0.25
USP40-212ENST00000473191 EDDM3BP56851 147 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 CDC42P60953 191 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 LRRC75BQ2VPJ9 315 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 OR5R1Q8NH85 324 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 RFT1Q96AA3 541 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 HRASLS5Q96KN8 279 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 SPACA5Q96QH8 159 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 CHST6Q9GZX3 395 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 USE1Q9NZ43 259 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 DSCAML1Q8TD84 2053 aa13.51□□□□□ -0.25
USP40-212ENST00000473191 PSPNO60542 156 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 POU3F4P49335 361 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 TMED1Q13445 227 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 EDDM3AQ14507 147 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 CCBE1Q6UXH8 406 aaPredicted RBP13.5□□□□□ -0.25
USP40-212ENST00000473191 EGFL6Q8IUX8 553 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 C11orf44Q8N8P7 122 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 EMG1Q92979 244 aaKnown RBP13.5□□□□□ -0.25
USP40-212ENST00000473191 RFKQ969G6 155 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 FGGYQ96C11 551 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 BORCS8Q96FH0 119 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 ADI1Q9BV57 179 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 FAM234AQ9H0X4 552 aa13.5□□□□□ -0.25
USP40-212ENST00000473191 VWFP04275 2813 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 IGKV1-12A0A0C4DH73 117 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 FAM90A8PA6NJQ4 464 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 HAND1O96004 215 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 IGKV1D-12P01611 117 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 CHRM2P08172 466 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 UBCP0CG48 685 aaKnown RBP13.49□□□□□ -0.25
USP40-212ENST00000473191 GABRB1P18505 474 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 HABP2Q14520 560 aaPredicted RBP13.49□□□□□ -0.25
USP40-212ENST00000473191 BAIAP2L2Q6UXY1 529 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 FAM220AQ7Z4H9 259 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 OR4S1Q8NGB4 309 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 C4orf36Q96KX1 117 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 SLC29A1Q99808 456 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 MMP27Q9H306 513 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 HEXA-AS1Q9H8Q6 139 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 ISG20L2Q9H9L3 353 aaKnown RBP13.49□□□□□ -0.25
USP40-212ENST00000473191 IMPAD1Q9NX62 359 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 FBLN5Q9UBX5 448 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 MYRFQ9Y2G1 1151 aa13.49□□□□□ -0.25
USP40-212ENST00000473191 DAPL1A0PJW8 107 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ODF3BA8MYP8 253 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 J3QLW9 94 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 M0QZ24 198 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 TIMM23O14925 209 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 SLC16A6O15403 523 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 GATBO75879 557 aaKnown RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 MMP23AO75900 390 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ARG1P05089 322 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ZNF728P0DKX0 622 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ZNF19P17023 458 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ATF1P18846 271 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 AZGP1P25311 298 aaKnown RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 ALDH3A2P51648 485 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 SNRPGP62308 76 aaKnown RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 ZNF91Q05481 1191 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 OCLNQ16625 522 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 PDLIM3Q53GG5 364 aaPredicted RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 LHFPL3Q86UP9 236 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 C1QL4Q86Z23 238 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ENTHD1Q8IYW4 607 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 OR8H2Q8N162 312 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 OR5D18Q8NGL1 313 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 FAM110DQ8TAY7 271 aaPredicted RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 TRUB1Q8WWH5 349 aaKnown RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 LGALS12Q96DT0 336 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 PELI1Q96FA3 418 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 ZNF649Q9BS31 505 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 AMBNQ9NP70 447 aa13.48□□□□□ -0.25
USP40-212ENST00000473191 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.48□□□□□ -0.25
USP40-212ENST00000473191 EXOGQ9Y2C4 368 aaKnown RBP13.48□□□□□ -0.25
USP40-212ENST00000473191 A0A1W2PPH5 198 aa13.47□□□□□ -0.25
USP40-212ENST00000473191 OR4C45A6NMZ5 311 aa13.47□□□□□ -0.25
USP40-212ENST00000473191 E9PI62 339 aa13.47□□□□□ -0.25
USP40-212ENST00000473191 ISG15P05161 165 aa13.47□□□□□ -0.25
USP40-212ENST00000473191 IGHV1-8P0DP01 117 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms