RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 OSR1Q8TAX0 266 aaPredicted RBP2.84□□□□□ -1.95
XRN1-209ENST00000472625 FAM81AQ8TBF8 368 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 NPIPB3Q92617 1050 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 CREB3L1Q96BA8 519 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 RCN3Q96D15 328 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 SLAMF6Q96DU3 332 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 REEP6Q96HR9 211 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 INTS14Q96SY0 518 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 SSX3Q99909 188 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 MCRIP2Q9BUT9 160 aaKnown RBP2.84□□□□□ -1.95
XRN1-209ENST00000472625 PRRG3Q9BZD7 231 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 C1orf21Q9H246 121 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 MOB1AQ9H8S9 216 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 PNRC2Q9NPJ4 139 aaKnown RBP2.84□□□□□ -1.95
XRN1-209ENST00000472625 SAR1AQ9NR31 198 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 SIRT7Q9NRC8 400 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 CHCHD3Q9NX63 227 aaKnown RBP2.84□□□□□ -1.95
XRN1-209ENST00000472625 NDUFAF4Q9P032 175 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 NLKQ9UBE8 527 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 ABCD2Q9UBJ2 740 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 GLS2Q9UI32 602 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 COMMD3-BMI1R4GMX3 469 aa2.84□□□□□ -1.95
XRN1-209ENST00000472625 TRBV4-1A0A0J9YWV2 114 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 LOC100653049A0A140TA62 436 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 hCG_38984A0A1B0GV85 526 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 OR6C68A6NDL8 312 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ACOD1A6NK06 481 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 DHRS7CA6NNS2 312 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 G3V4G9 280 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 J3KTA2 159 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ACOT8O14734 319 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MTRF1O75570 445 aaKnown RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 KRT34O76011 436 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TOMM40O96008 361 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 CST4P01036 141 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 LYNP07948 512 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ACAA1P09110 424 aaPredicted RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 H2BFMP0C1H6 154 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PRDX6P30041 224 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 BRS3P32247 399 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 VDAC2P45880 294 aaPredicted RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 OR12D2P58182 307 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ACTR3P61158 418 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 RPL31P62899 125 aaKnown RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 FAM3AP98173 230 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 SF3A3Q12874 501 aaKnown RBP eCLIP2.83□□□□□ -1.96
XRN1-209ENST00000472625 PRDX4Q13162 271 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 EIF2B1Q14232 305 aaKnown RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 MEP1BQ16820 701 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ZNF829Q3KNS6 432 aaPredicted RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 C4orf46Q504U0 113 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 FAM76BQ5HYJ3 339 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 FAM201AQ5SY85 155 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MINOS1Q5TGZ0 78 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 HIST2H2BDQ6DRA6 164 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 CCDC144NLQ6NUI1 221 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 KCTD18Q6PI47 426 aaPredicted RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 DEGS2Q6QHC5 323 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TBPL2Q6SJ96 375 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 RASSF6Q6ZTQ3 369 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 COMMD2Q86X83 199 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ZNF573Q86YE8 665 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PDZD9Q8IXQ8 264 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TIGD4Q8IY51 512 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 Q8IYB0 196 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 FAM185AQ8N0U4 392 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 Q8N2B8 174 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 NANOGP1Q8N7R0 232 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 C19orf18Q8NEA5 215 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 OR52J3Q8NH60 311 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ANGPTL6Q8NI99 470 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TEX47Q8TBZ9 253 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 GNPDA2Q8TDQ7 276 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ABHD5Q8WTS1 349 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 RNF133Q8WVZ7 376 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 GLMPQ8WWB7 406 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PHF21AQ96BD5 680 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MALSU1Q96EH3 234 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 DUS3LQ96G46 650 aaKnown RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 SDSLQ96GA7 329 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PGAM5Q96HS1 289 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PYURFQ96I23 114 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 NSMCE2Q96MF7 247 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TSSK2Q96PF2 358 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 CCL13Q99616 98 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ELOVL1Q9BW60 279 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MROQ9BYG7 248 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 KRTAP1-5Q9BYS1 174 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MUC13Q9H3R2 512 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 CCDC134Q9H6E4 229 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 GORASP2Q9H8Y8 452 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 PCDHB16Q9NRJ7 776 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 KRT84Q9NSB2 600 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 CENPMQ9NSP4 180 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 FGFR1OP2Q9NVK5 253 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 MRPL22Q9NWU5 206 aaKnown RBP2.83□□□□□ -1.96
XRN1-209ENST00000472625 CMTM6Q9NX76 183 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 ENPP5Q9UJA9 477 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TCF19Q9Y242 345 aa2.83□□□□□ -1.96
XRN1-209ENST00000472625 TSSC4Q9Y5U2 329 aaPredicted RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms