RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	TMEM212	A6NML5	194 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880		F8VVB4	439 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880		F8VWA3	439 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	NOS1AP	O75052	506 aa	Predicted RBP	12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	KNG1	P01042	644 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	PRKACA	P17612	351 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	DUSP1	P28562	367 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	ETV1	P50549	477 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	GTF2A1	P52655	376 aa	Predicted RBP	12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	EDDM3B	P56851	147 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	RPL31	P62899	125 aa	Known RBP	12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	COL10A1	Q03692	680 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	EDDM3A	Q14507	147 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	SLC9A3R2	Q15599	337 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	OR2G6	Q5TZ20	316 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	C9orf139	Q6ZV77	190 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	KIR3DL3	Q8N743	410 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	C19orf12	Q9NSK7	152 aa		12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	RBFOX1	Q9NWB1	397 aa	Known RBP	12.18	□□□□□ -0.46
SSR4-208	ENST00000471880	TRBV23-1	A0A0A0MS06	115 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880		A0A0U1RQK1	487 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	ANGPTL7	O43827	346 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	ZFPL1	O95159	310 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	PAH	P00439	452 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	LIMS3	P0CW19	117 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	LIMS4	P0CW20	117 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	BCL3	P20749	454 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	GABRR1	P24046	479 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	DCK	P27707	260 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	CAPG	P40121	348 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	GUCA2A	Q02747	115 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	UTS2B	Q765I0	119 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	GDPD3	Q7L5L3	318 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	SATL1	Q86VE3	508 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	PNKD	Q8N490	385 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	DNAAF1	Q8NEP3	725 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	SPSB1	Q96BD6	273 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	TMEM80	Q96HE8	168 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	C1orf147	Q96MC9	270 aa	Predicted RBP	12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	GPER1	Q99527	375 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	ZCCHC4	Q9H5U6	513 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	FGF20	Q9NP95	211 aa	Predicted RBP	12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	MRPS18A	Q9NVS2	196 aa	Known RBP	12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	GLS2	Q9UI32	602 aa		12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	CAB39	Q9Y376	341 aa	Predicted RBP	12.17	□□□□□ -0.46
SSR4-208	ENST00000471880	MEIOC	A2RUB1	952 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	MAGEB3	O15480	346 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	HAND1	O96004	215 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	TK1	P04183	234 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	CRYBA1	P05813	215 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	RNASE1	P07998	156 aa	Known RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	CHRM2	P08172	466 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	RPSA	P08865	295 aa	Known RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	NPBWR2	P48146	333 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	ADARB1	P78563	741 aa	Known RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	SCN1B	Q07699	218 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	IL18R1	Q13478	541 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	OGFRL1	Q5TC84	451 aa	Predicted RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	NCR3LG1	Q68D85	454 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	SERPINA12	Q8IW75	414 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880		Q8IYB0	196 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	FAM58A	Q8N1B3	248 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880		Q8N7P7	452 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	OR5D14	Q8NGL3	314 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	C8orf46	Q8TAG6	207 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	TAF15	Q92804	592 aa	Known RBP eCLIP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	FAM192A	Q9GZU8	254 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	CHST6	Q9GZX3	395 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	DCLRE1B	Q9H816	532 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	METTL8	Q9H825	291 aa	Known RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	HES4	Q9HCC6	221 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	IL36RN	Q9UBH0	155 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	GSTK1	Q9Y2Q3	226 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	EXOSC1	Q9Y3B2	195 aa	Known RBP	12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	PCDHGB5	Q9Y5G0	923 aa		12.16	□□□□□ -0.46
SSR4-208	ENST00000471880	PNMA8C	A0A1B0GUJ8	204 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	hCG_1809904	A0A1W2PP81	198 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880		A0A1W2PPE2	198 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880		A0A1W2PR64	198 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880		A0A1W2PRV1	198 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	TMEM89	A2RUT3	159 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	RNASEK-C17orf49	H0YIS7	233 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880		M0R1W7	72 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	SIRPB1	O00241	398 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	NPFF	O15130	113 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	CD2	P06729	351 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	MELTF	P08582	738 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	GNAO1	P09471	354 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	TMEM225B	P0DP42	221 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	CCL3L1	P16619	93 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	OMG	P23515	440 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	COX7A1	P24310	79 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	ERVK11-1	P61568	191 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	GABPB1	Q06547	395 aa	Predicted RBP	12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	PDZK1IP1	Q13113	114 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	XAF1	Q6GPH4	301 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	RPL22L1	Q6P5R6	122 aa	Known RBP	12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	AHSA2	Q719I0	299 aa		12.15	□□□□□ -0.46
SSR4-208	ENST00000471880	STX19	Q8N4C7	294 aa		12.15	□□□□□ -0.46

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