RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 DUX4L2P0CJ85 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L3P0CJ86 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L4P0CJ87 422 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L5P0CJ88 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L6P0CJ89 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L7P0CJ90 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 EEF1B2P24534 225 aaKnown RBP12.67□□□□□ -0.38
SDC3-203ENST00000471567 PRDX2P32119 198 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 CAV3P56539 151 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 GABARAPL2P60520 117 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 PPP3R1P63098 170 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 SCGB2A2Q13296 93 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 IKZF1Q13422 519 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DGUOKQ16854 277 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4L9Q6RFH8 374 aaPredicted RBP12.67□□□□□ -0.38
SDC3-203ENST00000471567 BTN2A1Q7KYR7 527 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 CD177Q8N6Q3 437 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 PNLDC1Q8NA58 520 aaKnown RBP12.67□□□□□ -0.38
SDC3-203ENST00000471567 NANPQ8TBE9 248 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 TMEM138Q9NPI0 162 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 DUX4Q9UBX2 424 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 SLC25A10Q9UBX3 287 aaPredicted RBP12.67□□□□□ -0.38
SDC3-203ENST00000471567 MAB21L2Q9Y586 359 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 JMJD1CQ15652 2540 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 ZNF879B4DU55 563 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 F8VVB4 439 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 F8VWA3 439 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 SPRY1O43609 319 aaPredicted RBP12.66□□□□□ -0.38
SDC3-203ENST00000471567 KDM4BO94953 1096 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 IGFBP3P17936 291 aaPredicted RBP12.66□□□□□ -0.38
SDC3-203ENST00000471567 FSTP19883 344 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 MAPK3P27361 379 aaPredicted RBP12.66□□□□□ -0.38
SDC3-203ENST00000471567 ZP1P60852 638 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 CRIP3Q6Q6R5 217 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 FIP1L1Q6UN15 594 aaKnown RBP12.66□□□□□ -0.38
SDC3-203ENST00000471567 OR51A2Q8NGJ7 313 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 SPACA5Q96QH8 159 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 OR14A2Q96R54 314 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 CKLFQ9UBR5 152 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 METRNQ9UJH8 293 aa12.66□□□□□ -0.38
SDC3-203ENST00000471567 RPUSD1Q9UJJ7 312 aaKnown RBP12.66□□□□□ -0.38
SDC3-203ENST00000471567 IGKV1-12A0A0C4DH73 117 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 INMTO95050 263 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 FSHBP01225 129 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 IGKV1D-12P01611 117 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 TFF1P04155 84 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 CHRM2P08172 466 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 TMEM225BP0DP42 221 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 SELLP14151 372 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 BCL3P20749 454 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 BDKRB2P30411 391 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 TGFBR2P37173 567 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 NPBWR2P48146 333 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 MLLT11Q13015 90 aaPredicted RBP12.65□□□□□ -0.38
SDC3-203ENST00000471567 TPBGQ13641 420 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 TBCEQ15813 527 aaPredicted RBP12.65□□□□□ -0.38
SDC3-203ENST00000471567 KRTAP21-3Q3LHN1 58 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 UNQ9370/PRO34162Q6UXP9 181 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 RNF144BQ7Z419 303 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 PRIMA1Q86XR5 153 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 FAM58AQ8N1B3 248 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 BATF2Q8N1L9 274 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 ZNRF1Q8ND25 227 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 LY6G5BQ8NDX9 201 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 PXT1Q8NFP0 134 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 OR52N4Q8NGI2 321 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 C8orf46Q8TAG6 207 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 UFD1Q92890 307 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 EMG1Q92979 244 aaKnown RBP12.65□□□□□ -0.38
SDC3-203ENST00000471567 DERL3Q96Q80 235 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 DCTN5Q9BTE1 182 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 FAM234AQ9H0X4 552 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 CNTD2Q9H8S5 307 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 FOXJ3Q9UPW0 622 aa12.65□□□□□ -0.38
SDC3-203ENST00000471567 ANGPTL7O43827 346 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 NDUFB7P17568 137 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 ADRA2CP18825 462 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 BMXP51813 675 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 ZNF146Q15072 292 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 SPIN3Q5JUX0 258 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 FGFRL1Q8N441 504 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 TMEM185AQ8NFB2 350 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 UPRTQ96BW1 309 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 GPER1Q99527 375 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 MGLLQ99685 303 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 HMG20AQ9NP66 347 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 RBFOX1Q9NWB1 397 aaKnown RBP12.64□□□□□ -0.39
SDC3-203ENST00000471567 GLS2Q9UI32 602 aa12.64□□□□□ -0.39
SDC3-203ENST00000471567 TRBV23-1A0A0A0MS06 115 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 GABRPO00591 440 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 PIN1P1O15428 100 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 HSMCR30P0CW71 290 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 CPEP16870 476 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 PRKACAP17612 351 aa12.63□□□□□ -0.39
SDC3-203ENST00000471567 ZNF93P35789 620 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms