RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 K7EN84 100 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CHST1O43916 411 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MPZL2O60487 215 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 EEDO75530 441 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CGAP01215 116 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 HPNP05981 417 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 DBIP07108 87 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CELA2AP08217 269 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SFTA3P0C7M3 94 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A8P0DMV1 189 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A9P0DMV2 189 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 GABRA3P34903 492 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SNCAP37840 140 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 RPS10P46783 165 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 GLRBP48167 497 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 FUT6P51993 359 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TAS2R20P59543 309 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SIRPAP78324 504 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 RPL24P83731 157 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 H3F3AP84243 136 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MEF2BQ02080 365 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 PLP2Q04941 152 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 BCL2L1Q07817 233 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM267Q0VDI3 215 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 BATFQ16520 125 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TBC1D28Q2M2D7 210 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TDRG1Q3Y452 100 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 PYDC2Q56P42 97 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CT45A2Q5DJT8 189 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MIIPQ5JXC2 388 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ARTNQ5T4W7 220 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 FAM102AQ5T9C2 384 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SPATA31B1PQ5VZV4 182 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 GLT8D1Q68CQ7 371 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 UNQ5815/PRO19632Q6UWF5 114 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 GTF2H5Q6ZYL4 71 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ACOT1Q86TX2 421 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF567Q8N184 647 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 OSR2Q8N2R0 312 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ZADH2Q8N4Q0 377 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 EID2Q8N6I1 236 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 OR2T12Q8NG77 320 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 OR4X1Q8NH49 305 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 OR52I2Q8NH67 350 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 BLNKQ8WV28 456 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SCAMP4Q969E2 229 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 SARAFQ96BY9 339 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 IMP4Q96G21 291 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 LIN37Q96GY3 246 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ADTRPQ96IZ2 230 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CCDC115Q96NT0 180 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 OR4K3Q96R72 315 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 IMMP2LQ96T52 175 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MBOAT4Q96T53 435 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CDX2Q99626 313 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 PITX2Q99697 317 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 NRTNQ99748 197 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 C16orf70Q9BSU1 422 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 GATA5Q9BWX5 397 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 C1QTNF4Q9BXJ3 329 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 EBPLQ9BY08 206 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 FGFBP2Q9BYJ0 223 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TUBB1Q9H4B7 451 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM74BQ9NUR3 256 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ASIC5Q9NY37 505 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 FKBP11Q9NYL4 201 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 NTMQ9P121 344 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 RPS6KB2Q9UBS0 482 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 UQCR10Q9UDW1 63 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 KCNS2Q9ULS6 477 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 RAI2Q9Y5P3 530 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 RBM8AQ9Y5S9 174 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 A2ML1A8K2U0 1454 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ABCA3Q99758 1704 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 FMN2Q9NZ56 1722 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF638Q14966 1978 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ZCCHC11Q5TAX3 1644 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 FER1L6Q2WGJ9 1857 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 A0A0G2JLM5 398 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 TINCRA0A1B0GVN0 87 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1W2PRF3 423 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1W2PRM7 423 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE12JA6NER3 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 FABP5P3A8MUU1 101 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 B4DEV8 164 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 PYCARD-AS1I3L0S3 204 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 J3QR89 54 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 RAB27BO00194 218 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 DHHO43323 396 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 YPEL1O60688 119 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 ZG16O60844 167 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GCM2O75603 506 aaPredicted RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAGE7O76087 117 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CDRT1O95170 752 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 CLDN7O95471 211 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 NUDT3O95989 172 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 VTNP04004 478 aa4.44□□□□□ -1.7
COL3A1-205ENST00000470167 GAPDHP04406 335 aaKnown RBP4.44□□□□□ -1.7
COL3A1-205ENST00000470167 IFNW1P05000 195 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms