RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 CCDC54Q8NEL0 328 aa17.71■□□□□ 0.43
TTC28-204ENST00000468807 EMG1Q92979 244 aaKnown RBP17.71■□□□□ 0.43
TTC28-204ENST00000468807 KIR3DL2P43630 455 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 EDDM3AQ14507 147 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 ZIK1Q3SY52 487 aaPredicted RBP17.7■□□□□ 0.42
TTC28-204ENST00000468807 C11orf42Q8N5U0 333 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 RNFT2Q96EX2 444 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 AJUBAQ96IF1 538 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 MEGF9Q9H1U4 602 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 SIGLEC9Q9Y336 463 aa17.7■□□□□ 0.42
TTC28-204ENST00000468807 DAPL1A0PJW8 107 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 EI24O14681 340 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 ENTPD6O75354 484 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 ARG1P05089 322 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 ZNF20P17024 532 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 POU3F4P49335 361 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 SNU13P55769 128 aaKnown RBP17.69■□□□□ 0.42
TTC28-204ENST00000468807 LHFPL4Q7Z7J7 247 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 OR4C13Q8NGP0 309 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 PPP1R35Q8TAP8 253 aa17.69■□□□□ 0.42
TTC28-204ENST00000468807 TRUB1Q8WWH5 349 aaKnown RBP17.69■□□□□ 0.42
TTC28-204ENST00000468807 TSPAN15O95858 294 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 CYB5AP00167 134 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 OCM2P0CE71 109 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 OCMP0CE72 109 aaPredicted RBP17.68■□□□□ 0.42
TTC28-204ENST00000468807 CALCBP10092 127 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 GABRR1P24046 479 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 ATP1B3P54709 279 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 ACTC1P68032 377 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 ACTA1P68133 377 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 TMEM244Q5VVB8 128 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 OR8H2Q8N162 312 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 OR2G2Q8NGZ5 317 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 FAM110DQ8TAY7 271 aaPredicted RBP17.68■□□□□ 0.42
TTC28-204ENST00000468807 PP6455Q8WZ26 134 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 C10orf35Q96D05 121 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 ADAT3Q96EY9 351 aaPredicted RBP17.68■□□□□ 0.42
TTC28-204ENST00000468807 NKX3-1Q99801 234 aaPredicted RBP17.68■□□□□ 0.42
TTC28-204ENST00000468807 CHST6Q9GZX3 395 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 RAB18Q9NP72 206 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 IL36RNQ9UBH0 155 aa17.68■□□□□ 0.42
TTC28-204ENST00000468807 TET2Q6N021 2002 aaPredicted RBP17.67■□□□□ 0.42
TTC28-204ENST00000468807 DSCAML1Q8TD84 2053 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 TGP01266 2768 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 C17orf98A8MV24 154 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 ZNF737O75373 536 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 HAND1O96004 215 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 ALPLP05186 524 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 ZNF728P0DKX0 622 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 RBP2P50120 134 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 MTCP1P56278 107 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 ISL1P61371 349 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 DYNC1I2Q13409 638 aaKnown RBP17.67■□□□□ 0.42
TTC28-204ENST00000468807 KPNB1Q14974 876 aaKnown RBP17.67■□□□□ 0.42
TTC28-204ENST00000468807 OCLNQ16625 522 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 OR13D1Q8NGV5 346 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 FGGYQ96C11 551 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 RBFOX1Q9NWB1 397 aaKnown RBP17.67■□□□□ 0.42
TTC28-204ENST00000468807 FBLN5Q9UBX5 448 aa17.67■□□□□ 0.42
TTC28-204ENST00000468807 TMEM82A0PJX8 343 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 HTR1AP08908 422 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 BCL3P20749 454 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 AZGP1P25311 298 aaKnown RBP17.66■□□□□ 0.42
TTC28-204ENST00000468807 DUSP1P28562 367 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 DLX6P56179 175 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 OR12D2P58182 307 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 GRK1Q15835 563 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 FAM189A2Q15884 450 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 AANATQ16613 207 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 C2orf68Q2NKX9 166 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 PDLIM3Q53GG5 364 aaPredicted RBP17.66■□□□□ 0.42
TTC28-204ENST00000468807 Q8IYB0 196 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 TPRX1Q8N7U7 411 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 OR2T6Q8NHC8 308 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 RFT1Q96AA3 541 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 HRASLS5Q96KN8 279 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 SNX22Q96L94 193 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 ZNF714Q96N38 554 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 ABCB10Q9NRK6 738 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 FRRS1LQ9P0K9 344 aa17.66■□□□□ 0.42
TTC28-204ENST00000468807 J3QLW9 94 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 SLC16A6O15403 523 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 IGHA1P01876 353 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 ZNF19P17023 458 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 PRKACAP17612 351 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 ATF1P18846 271 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 PRKACBP22694 351 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 PEX2P28328 305 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 NPBWR2P48146 333 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 ALDH3A2P51648 485 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 NANOS3P60323 173 aaKnown RBP17.65■□□□□ 0.42
TTC28-204ENST00000468807 MEDAGQ5VYS4 303 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 Q6ZTK2 550 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 KCTD20Q7Z5Y7 419 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 ENTHD1Q8IYW4 607 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 FAM58AQ8N1B3 248 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 C11orf44Q8N8P7 122 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 DNAAF1Q8NEP3 725 aa17.65■□□□□ 0.42
TTC28-204ENST00000468807 RNF166Q96A37 237 aaPredicted RBP17.65■□□□□ 0.42
TTC28-204ENST00000468807 NPFFR1Q9GZQ6 430 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms