RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 CEP19Q96LK0 163 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 NKX3-1Q99801 234 aaPredicted RBP19.79■□□□□ 0.76
PTCH1-210ENST00000468211 PLEKHA1Q9HB21 404 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 IL36RNQ9UBH0 155 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.79■□□□□ 0.76
PTCH1-210ENST00000468211 SLC7A11Q9UPY5 501 aa19.79■□□□□ 0.76
PTCH1-210ENST00000468211 TMEM82A0PJX8 343 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 CHRM2P08172 466 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 ZNF728P0DKX0 622 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 EDDM3BP56851 147 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 HABP2Q14520 560 aaPredicted RBP19.78■□□□□ 0.76
PTCH1-210ENST00000468211 RDH10Q8IZV5 341 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 NPFFR1Q9GZQ6 430 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 CHST5Q9GZS9 411 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 ZNF702PQ9H963 129 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 RAB18Q9NP72 206 aa19.78■□□□□ 0.76
PTCH1-210ENST00000468211 VGLL3A8MV65 326 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 ARG1P05089 322 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 VSIG10L2P0DP72 767 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 JUNBP17275 347 aaPredicted RBP19.77■□□□□ 0.76
PTCH1-210ENST00000468211 KIR3DL2P43630 455 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 FUT6P51993 359 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 ZNF85Q03923 595 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 SLC25A26Q70HW3 274 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 EME1Q96AY2 570 aa19.77■□□□□ 0.76
PTCH1-210ENST00000468211 G3V4G9 280 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 DYNC1I1O14576 645 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 SULT1C4O75897 302 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 IGHA1P01876 353 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 IGHV1-8P0DP01 117 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 ISL1P61371 349 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 FAM189A2Q15884 450 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 TP53I3Q53FA7 332 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 ZNF626Q68DY1 528 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 C11orf88Q6PI97 169 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 LIAT1Q6ZQX7 453 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 GDPD3Q7L5L3 318 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 TMEM219Q86XT9 240 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 EGFL6Q8IUX8 553 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 OR8H2Q8N162 312 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 LYG1Q8N1E2 194 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 TPRX1Q8N7U7 411 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 OR11H6Q8NGC7 330 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 OR52N4Q8NGI2 321 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 GABARAPL3Q9BY60 117 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 RIBC2Q9H4K1 309 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 SERTAD4Q9NUC0 356 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 TCF19Q9Y242 345 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 KIAA2026Q5HYC2 2103 aa19.76■□□□□ 0.75
PTCH1-210ENST00000468211 A0A0G2JK05 382 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 LOC107986453A0A1B0GWG9 222 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 NPBWR2P48146 333 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 EDDM3AQ14507 147 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 SSX2Q16385 188 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 ADAT3Q96EY9 351 aaPredicted RBP19.75■□□□□ 0.75
PTCH1-210ENST00000468211 ENOPH1Q9UHY7 261 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 OAZ3Q9UMX2 235 aa19.75■□□□□ 0.75
PTCH1-210ENST00000468211 TBL2Q9Y4P3 447 aaKnown RBP19.75■□□□□ 0.75
PTCH1-210ENST00000468211 IGKV1-9A0A0C4DH69 117 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 A6NDX4 124 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 RBP4P02753 201 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 OPN1MWP04001 364 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 OPN1MW2P0DN77 364 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 OPN1MW3P0DN78 364 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 CALCBP10092 127 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 DUSP1P28562 367 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 C1orf146Q5VVC0 180 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 OR8J1Q8NGP2 316 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 OR13D1Q8NGV5 346 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 EMG1Q92979 244 aaKnown RBP19.74■□□□□ 0.75
PTCH1-210ENST00000468211 MALSU1Q96EH3 234 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 BORCS8Q96FH0 119 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 SNX22Q96L94 193 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 ADI1Q9BV57 179 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 RBFOX1Q9NWB1 397 aaKnown RBP19.74■□□□□ 0.75
PTCH1-210ENST00000468211 GNG8Q9UK08 70 aa19.74■□□□□ 0.75
PTCH1-210ENST00000468211 GATBO75879 557 aaKnown RBP19.73■□□□□ 0.75
PTCH1-210ENST00000468211 HAND1O96004 215 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 BEAN1Q3B7T3 259 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 Q6ZS46 218 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 Q8N2B8 174 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 ZNF714Q96N38 554 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 OSBPL10Q9BXB5 764 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 CHST6Q9GZX3 395 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 NOTCH3Q9UM47 2321 aa19.73■□□□□ 0.75
PTCH1-210ENST00000468211 SAC3D1A6NKF1 404 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 PSPNO60542 156 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 FCGR1AP12314 374 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 BCL3P20749 454 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ATP6V1E1P36543 226 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ACTA2P62736 377 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ACTG2P63267 376 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ACTC1P68032 377 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ACTA1P68133 377 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 ZNF91Q05481 1191 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 MEF2CQ06413 473 aaPredicted RBP19.72■□□□□ 0.75
PTCH1-210ENST00000468211 DYNC1I2Q13409 638 aaKnown RBP19.72■□□□□ 0.75
PTCH1-210ENST00000468211 RPS4Y2Q8TD47 263 aa19.72■□□□□ 0.75
PTCH1-210ENST00000468211 FOXRED1Q96CU9 486 aaPredicted RBP19.72■□□□□ 0.75
PTCH1-210ENST00000468211 MMP23AO75900 390 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms