RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 ZFYVE26Q68DK2 2539 aa17.51■□□□□ 0.39
TMEM53-207ENST00000468117 NAP1L6A6NFF2 107 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 AKR7A2O43488 359 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 TCRBP04435 133 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 AKAIN1P0CW23 69 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 KLF3P57682 345 aaPredicted RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 TAS2R19P59542 299 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 FGF12P61328 243 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 OR52W1Q6IF63 320 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 STEAP1BQ6NZ63 245 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 OR13G1Q8NGZ3 307 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 CA5BP1Q8WTZ4 195 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 MARVELD1Q9BSK0 173 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 IFT46Q9NQC8 304 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 NUDT15Q9NV35 164 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 NKIRAS2Q9NYR9 191 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 TRAV6A0A075B6T7 132 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 CDIPTO14735 213 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 IGHV3-13P01766 116 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 RAB25P57735 213 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 RPS23P62266 143 aaKnown RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 BRICD5Q6PL45 260 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 SLC22A25Q6T423 547 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 TMEM229BQ8NBD8 167 aa17.5■□□□□ 0.39
TMEM53-207ENST00000468117 GTF3AQ92664 365 aaKnown RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 RNASE6Q93091 150 aaKnown RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 ERRFI1Q9UJM3 462 aaPredicted RBP17.5■□□□□ 0.39
TMEM53-207ENST00000468117 A0A0B4J293 547 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 SERPINE3A8MV23 424 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 OR7C1O76099 320 aaPredicted RBP17.49■□□□□ 0.39
TMEM53-207ENST00000468117 CHATP28329 748 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 RCVRNP35243 200 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 FAUP35544 74 aaKnown RBP17.49■□□□□ 0.39
TMEM53-207ENST00000468117 UQCRFS1P47985 274 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 MAB21L1Q13394 359 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 DEDD2Q8WXF8 326 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 CREB3L1Q96BA8 519 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 FAAP24Q9BTP7 215 aa17.49■□□□□ 0.39
TMEM53-207ENST00000468117 TMEM210A6NLX4 147 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 ZNF736B4DX44 427 aaPredicted RBP17.48■□□□□ 0.39
TMEM53-207ENST00000468117 M0QYG6 137 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 PRKACAP17612 351 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 ARL6IP1Q15041 203 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 OR56B4Q8NH76 319 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 FBXW5Q969U6 566 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 MRPL37Q9BZE1 423 aaKnown RBP17.48■□□□□ 0.39
TMEM53-207ENST00000468117 CXXC4Q9H2H0 198 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 CA10Q9NS85 328 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 HSF4Q9ULV5 492 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 EPG5Q9HCE0 2579 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 IGLV3-9A0A075B6K5 115 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 INMT-MINDY4F8WBC2 141 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 NUP37Q8NFH4 326 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 OR2Z1Q8NG97 314 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 CNTNAP3BQ96NU0 1288 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 SULT4A1Q9BR01 284 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 CNTNAP3Q9BZ76 1288 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 TINAGL1Q9GZM7 467 aaPredicted RBP17.48■□□□□ 0.39
TMEM53-207ENST00000468117 COPZ2Q9P299 210 aa17.48■□□□□ 0.39
TMEM53-207ENST00000468117 A0A1B0GWJ7 208 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 RAB3DO95716 219 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 DUSP1P28562 367 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ADAM5Q6NVV9 412 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ZNF782Q6ZMW2 699 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-207ENST00000468117 LINC01560Q8TB33 94 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 HDHD3Q9BSH5 251 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-207ENST00000468117 NGBQ9NPG2 151 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ZNF230Q9UIE0 474 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ZNF107Q9UII5 783 aaPredicted RBP17.47■□□□□ 0.39
TMEM53-207ENST00000468117 POLDIP2Q9Y2S7 368 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 NUBP2Q9Y5Y2 271 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 HCFC1P51610 2035 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 A0A1B0GUH1 482 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ZSCAN5BA6NJL1 495 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 GNLYP22749 145 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 MPPED2Q15777 294 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 TATDN3Q17R31 274 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 NHLRC3Q5JS37 347 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 ATAD3CQ5T2N8 411 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 PRAMEF6Q5VXH4 476 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 FAM58AQ8N1B3 248 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 OR51S1Q8NGJ8 323 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 DYRK2Q92630 601 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 SNAPC3Q92966 411 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 EMG1Q92979 244 aaKnown RBP17.47■□□□□ 0.39
TMEM53-207ENST00000468117 OCSTAMPQ9BR26 566 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 AK3Q9UIJ7 227 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 CACNA1DQ01668 2161 aa17.47■□□□□ 0.39
TMEM53-207ENST00000468117 PKDREJQ9NTG1 2253 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 PLSCR5A0PG75 271 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 PDCD6O75340 191 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 CD74P04233 296 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 GMFBP60983 142 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 ZNF826PQ6ZT77 177 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 C11orf53Q8IXP5 236 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 SPERTQ8NA61 448 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 KCNJ16Q9NPI9 418 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 TAAR3PQ9P1P4 343 aa17.46■□□□□ 0.39
TMEM53-207ENST00000468117 FUT3P21217 361 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms