RNA–Protein interactions for RNA: ENST00000467112.5

RRP1-201, Transcript of ribosomal RNA processing 1, humanhuman

TSL 1 (best)

Gene RRP1, Length 3,019 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1-201ENST00000467112 CCDC187A0A096LP49 1063 aa13□□□□□ -0.33
RRP1-201ENST00000467112 GPR137BO60478 399 aa13□□□□□ -0.33
RRP1-201ENST00000467112 ZFAND5O76080 213 aa13□□□□□ -0.33
RRP1-201ENST00000467112 OR8U8P0C7N1 319 aa13□□□□□ -0.33
RRP1-201ENST00000467112 NOVA1P51513 510 aaKnown RBP13□□□□□ -0.33
RRP1-201ENST00000467112 EIF3IQ13347 325 aaKnown RBP13□□□□□ -0.33
RRP1-201ENST00000467112 RSU1Q15404 277 aa13□□□□□ -0.33
RRP1-201ENST00000467112 FBXW12Q6X9E4 464 aa13□□□□□ -0.33
RRP1-201ENST00000467112 COMMD1Q8N668 190 aa13□□□□□ -0.33
RRP1-201ENST00000467112 SLC22A8Q8TCC7 542 aa13□□□□□ -0.33
RRP1-201ENST00000467112 NABP1Q96AH0 204 aa13□□□□□ -0.33
RRP1-201ENST00000467112 ZNF837Q96EG3 531 aaPredicted RBP13□□□□□ -0.33
RRP1-201ENST00000467112 KCNJ16Q9NPI9 418 aa13□□□□□ -0.33
RRP1-201ENST00000467112 SLC2A9Q9NRM0 540 aa13□□□□□ -0.33
RRP1-201ENST00000467112 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
RRP1-201ENST00000467112 HDGFL3Q9Y3E1 203 aa13□□□□□ -0.33
RRP1-201ENST00000467112 IGHV2-5P01817 119 aa13□□□□□ -0.33
RRP1-201ENST00000467112 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
RRP1-201ENST00000467112 CPEB2Q7Z5Q1 589 aaKnown RBP13□□□□□ -0.33
RRP1-201ENST00000467112 SGK3Q96BR1 496 aa13□□□□□ -0.33
RRP1-201ENST00000467112 OR6C1Q96RD1 312 aa13□□□□□ -0.33
RRP1-201ENST00000467112 RASL10BQ96S79 203 aa13□□□□□ -0.33
RRP1-201ENST00000467112 IGKV1-27A0A075B6S5 117 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 FAM209BQ5JX69 171 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 FAM213BQ8TBF2 198 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 UCN2Q96RP3 112 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 METTL9Q9H1A3 318 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 MIOXQ9UGB7 285 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 RCL1Q9Y2P8 373 aaKnown RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 OTX1P32242 354 aaPredicted RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 PDCD1Q15116 288 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 ZNF239Q16600 458 aaKnown RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 OR1J1Q8NGS3 322 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 SPACA9Q96E40 222 aaPredicted RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 RARRES2Q99969 163 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 SLC35B3Q9H1N7 401 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 NSG1A0A0A6YYJ2 146 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 H7C1Q1 480 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 CLN5O75503 358 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 PIGYQ3MUY2 71 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 SLC22A25Q6T423 547 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 ZNF574Q6ZN55 896 aaPredicted RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 KMT5CQ86Y97 462 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 ZNF565Q8N9K5 539 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 MSI2Q96DH6 328 aaKnown RBP12.99□□□□□ -0.33
RRP1-201ENST00000467112 C18orf12Q96KH6 178 aa12.99□□□□□ -0.33
RRP1-201ENST00000467112 PUS1Q9Y606 427 aaKnown RBP eCLIP12.99□□□□□ -0.33
RRP1-201ENST00000467112 GEMIN2O14893 280 aaKnown RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 GPR37O15354 613 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 EIF1BO60739 113 aaKnown RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 CD63P08962 238 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 EIF1P41567 113 aaKnown RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 GPR157Q5UAW9 335 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 KDF1Q8NAX2 398 aaPredicted RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 LOC102725191A0A1B0GVB3 256 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 CCDC85CA6NKD9 419 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 ST8SIA3O43173 380 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 DHHO43323 396 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 SCRG1O75711 98 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 ITGA3P26006 1051 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 DUSP1P28562 367 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 PMELP40967 661 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 SUCLG1P53597 346 aaKnown RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 POLR2GP62487 172 aaKnown RBP eCLIP12.98□□□□□ -0.33
RRP1-201ENST00000467112 H3F3AP84243 136 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 NCMAPQ5T1S8 102 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 WDR74Q6RFH5 385 aaPredicted RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 MEX3BQ6ZN04 569 aaKnown RBP12.98□□□□□ -0.33
RRP1-201ENST00000467112 RABEPKQ7Z6M1 372 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 MTCH2Q9Y6C9 303 aa12.98□□□□□ -0.33
RRP1-201ENST00000467112 LMO1P25800 156 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 CHATP28329 748 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 CLINT1Q14677 625 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 SHBQ15464 509 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 FADS6Q8N9I5 356 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 SUCNR1Q9BXA5 334 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 DEFB126Q9BYW3 111 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 AKIRIN1Q9H9L7 192 aaPredicted RBP12.97□□□□□ -0.33
RRP1-201ENST00000467112 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.97□□□□□ -0.33
RRP1-201ENST00000467112 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.97□□□□□ -0.33
RRP1-201ENST00000467112 CCL20P78556 96 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 RHEBQ15382 184 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 TSC22D1Q15714 1073 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 IGSF11Q5DX21 431 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 OR10AD1Q8NGE0 317 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 AKR7LQ8NHP1 331 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 TMEM54Q969K7 222 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 ABHD14AQ9BUJ0 271 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 PBDC1Q9BVG4 233 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 CHCHD2Q9Y6H1 151 aaPredicted RBP12.97□□□□□ -0.33
RRP1-201ENST00000467112 NPIPA2E9PIF3 369 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 NPIPA3F8WFD2 350 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 DTYMKP23919 212 aa12.97□□□□□ -0.33
RRP1-201ENST00000467112 RPS23P62266 143 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms