RNA–Protein interactions for RNA: ENST00000466971.1

NFX1-206, Transcript of nuclear transcription factor, X-box binding 1, human

TSL 5

Gene NFX1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NFX1-206	ENST00000466971	PECR	Q9BY49	303 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	KCNK15	Q9H427	330 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	BANF2	Q9H503	90 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	C7orf69	Q9H7B7	122 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	IFT22	Q9H7X7	185 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	RANGRF	Q9HD47	186 aa	Predicted RBP	4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	ELOVL5	Q9NYP7	299 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	MYEF2	Q9P2K5	600 aa	Known RBP	4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF629	Q9UEG4	869 aa	Predicted RBP	4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	PFDN2	Q9UHV9	154 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	MGAT4A	Q9UM21	535 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	WASF3	Q9UPY6	502 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	ST3GAL6	Q9Y274	331 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	KCNK7	Q9Y2U2	307 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	NPTN	Q9Y639	398 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	ALPK2	Q86TB3	2170 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	MED13	Q9UHV7	2174 aa		4.11	□□□□□ -1.75
NFX1-206	ENST00000466971	CACNA1C	Q13936	2221 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971		A0A0A6YYD4	124 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971		A0A0B4J2A0	478 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	KIR2DS1	A0A191URI9	304 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	MEIS3P1	A6NDR6	274 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF503-AS2	A6NEH8	195 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF732	B4DXR9	585 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PYCARD-AS1	I3L0S3	204 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971		J3QT63	122 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SSX5	O60225	188 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	LYZL6	O75951	148 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	RLN1	P04808	185 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	CTXN2	P0C2S0	81 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FAM87A	P0C7U9	286 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF735	P0CB33	412 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PTHLH	P12272	177 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF35	P13682	527 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PPP3CB	P16298	524 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FUT3	P21217	361 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	KITLG	P21583	273 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GABRR1	P24046	479 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FPR2	P25090	351 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	CHAT	P28329	748 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GCH1	P30793	250 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	HRH1	P35367	487 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	MDH2	P40926	338 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	WNT5A	P41221	380 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	KIR2DS4	P43632	304 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	HAAO	P46952	286 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GZMK	P49863	264 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	IDH3G	P51553	393 aa	Predicted RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	CASP6	P55212	293 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FOXG1	P55316	489 aa	Predicted RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SNU13	P55769	128 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	RBM11	P57052	281 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ARPC4	P59998	168 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SEC61A1	P61619	476 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	TSPAN5	P62079	268 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	RPS23	P62266	143 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	KIR2DS1	Q14954	304 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FCN2	Q15485	313 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	TBR1	Q16650	682 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF718	Q3SXZ3	478 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	CHRFAM7A	Q494W8	412 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SCGB2B2	Q4G0G5	96 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SHE	Q5VZ18	495 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	MBNL2	Q5VZF2	373 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	VWA1	Q6PCB0	445 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	RFPL4B	Q6ZWI9	263 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SLC25A26	Q70HW3	274 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	C1QL2	Q7Z5L3	287 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	MRGPRG	Q86SM5	289 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PEG10	Q86TG7	708 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SLC25A42	Q86VD7	318 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GCNT2	Q8N0V5	402 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF610	Q8N9Z0	462 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	BEST4	Q8NFU0	473 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	OR1J1	Q8NGS3	322 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	TERB2	Q8NHR7	220 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GRPEL2	Q8TAA5	225 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZFAND1	Q8TCF1	268 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	NUDCD2	Q8WVJ2	157 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	HPSE2	Q8WWQ2	592 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	EMG1	Q92979	244 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	FBXW5	Q969U6	566 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	RNF170	Q96K19	258 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PHB2	Q99623	299 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	VRK1	Q99986	396 aa	Predicted RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	CMSS1	Q9BQ75	279 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	NICN1	Q9BSH3	213 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GON7	Q9BXV9	100 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	PPA2	Q9H2U2	334 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	POFUT1	Q9H488	388 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SLA2	Q9H6Q3	261 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZMAT3	Q9HA38	289 aa	Known RBP	4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF286A	Q9HBT8	521 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	C12orf4	Q9NQ89	552 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	NECAP2	Q9NVZ3	263 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	TREM2	Q9NZC2	230 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	ZNF69	Q9UC07	566 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	SHPK	Q9UHJ6	478 aa		4.1	□□□□□ -1.75
NFX1-206	ENST00000466971	GLS2	Q9UI32	602 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms