RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PSG3Q16557 428 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 ACTL10Q5JWF8 245 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CLLU1OSQ5K130 101 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF678Q5SXM1 525 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 MRPL2Q5T653 305 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 KPRPQ5T749 579 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 RESP18Q5W5W9 173 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 PDPK2PQ6A1A2 396 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CLEC6AQ6EIG7 209 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CLEC19AQ6UXS0 136 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 COMTD1Q86VU5 262 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 PDPNQ86YL7 162 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 CCNYL1Q8N7R7 359 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR8A1Q8NGG7 326 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF420Q8TAQ5 688 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 ADTRPQ96IZ2 230 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 C8orf76Q96K31 380 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 DERL3Q96Q80 235 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 SHCBP1LQ9BZQ2 653 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 DDIT4Q9NX09 232 aa2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 KLF13Q9Y2Y9 288 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 RBMX2Q9Y388 322 aaKnown RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 V9GYY5 206 aaPredicted RBP2.37□□□□□ -2.03
CDC42BPA-211ENST00000466538 GMNCA6NCL1 334 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 K7EM74 188 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 SLC37A4O43826 429 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGHV1-46P01743 117 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 TAC1P20366 129 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 RANBP1P43487 201 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 GDI2P50395 445 aaKnown RBP2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 VSNL1P62760 191 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 C2orf80Q0P641 193 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 STX4Q12846 297 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 TNXAQ16473 311 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 CCDC122Q5T0U0 273 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 COPS6Q7L5N1 327 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 SSX6Q7RTT6 188 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 FAM19A1Q7Z5A9 133 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 ITPRIPQ8IWB1 547 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 LRRC8AQ8IWT6 810 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 GAPTQ8N292 157 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 TCAIMQ8N3R3 496 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 ATPAF2Q8N5M1 289 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 UBA3Q8TBC4 463 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 YIPF5Q969M3 257 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 RDH14Q9HBH5 336 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 TREM1Q9NP99 234 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 DIABLOQ9NR28 239 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 SDHAF3Q9NRP4 125 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 INSIG2Q9Y5U4 225 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
CDC42BPA-211ENST00000466538 ADAMTSL3P82987 1691 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 MGAT4DA6NG13 374 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR6C70A6NIJ9 312 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 hCG_2039718K7EN88 272 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 CD5P06127 495 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 KCNJ3P48549 501 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 XKP51811 444 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 TSPAN5P62079 268 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 FLI1Q01543 452 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 ELOCQ15369 112 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 GUSBP1Q15486 140 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGFBP7Q16270 282 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 CEACAM16Q2WEN9 425 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 TBPL2Q6SJ96 375 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 CYP4Z1Q86W10 505 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR5H2Q8NGV7 314 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 CCDC124Q96CT7 223 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 QKIQ96PU8 341 aaKnown RBP eCLIP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 ACBD6Q9BR61 282 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 THTPAQ9BU02 230 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 PRRG3Q9BZD7 231 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 NXF2Q9GZY0 626 aaKnown RBP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 GOLPH3Q9H4A6 298 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 PARVGQ9HBI0 331 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 INIPQ9NRY2 104 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 CLEC2DQ9UHP7 191 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF229Q9UJW7 825 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 SCN4AP35499 1836 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 KIAA1671Q9BY89 1806 aa2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 BRD4O60885 1362 aaPredicted RBP2.35□□□□□ -2.03
CDC42BPA-211ENST00000466538 NOS1P29475 1434 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 OR2A4O95047 310 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 CST4P01036 141 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 IGKV1-17P01599 117 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 RLN2P04090 185 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 GIMD1P0DJR0 217 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 TEAD1P28347 426 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 RAB38P57729 211 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 RBX1P62877 108 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 BIKQ13323 160 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 SYCP1Q15431 976 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF404Q494X3 552 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 LCE3AQ5TA76 89 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 LINC00337Q8N6G1 96 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZDHHC22Q8N966 263 aa2.34□□□□□ -2.03
CDC42BPA-211ENST00000466538 ZNF555Q8NEP9 628 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms