RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SSX1Q16384 188 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 LRRC10Q5BKY1 277 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 CD200R1LQ6Q8B3 271 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 ASCL4Q6XD76 172 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 TMEM91Q6ZNR0 172 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 FAM58AQ8N1B3 248 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 ZNF561Q8N587 486 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 OR5T2Q8NGG2 359 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 FOXRED1Q96CU9 486 aaPredicted RBP14.11□□□□□ -0.15
USP39-211ENST00000465282 SEH1LQ96EE3 360 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 SDSLQ96GA7 329 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 DMRTB1Q96MA1 342 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 ZNF488Q96MN9 340 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 CCL13Q99616 98 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 UQCC2Q9BRT2 126 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 YAE1D1Q9NRH1 226 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 SNTG1Q9NSN8 517 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 HIF1ANQ9NWT6 349 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 OR5V1Q9UGF6 321 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 GLS2Q9UI32 602 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 ZNF222Q9UK12 451 aa14.11□□□□□ -0.15
USP39-211ENST00000465282 ARHGAP32A7KAX9 2087 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 IGKV1D-17A0A075B6S4 117 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 A0A0G2JMP0 313 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 A0A0X1KG70 313 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 RFPL4AA6NLU0 287 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 KIAA1324LA8MWY0 1029 aaPredicted RBP14.1□□□□□ -0.15
USP39-211ENST00000465282 RFPL4AL1F8VTS6 287 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 J3QLI3 93 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 GABRPO00591 440 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 DVL1O14640 695 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 SIGLEC5O15389 551 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 NDUFB3O43676 98 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 ZNF780AO75290 641 aaPredicted RBP14.1□□□□□ -0.15
USP39-211ENST00000465282 INMTO95050 263 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 PRDX2P32119 198 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 RANBP1P43487 201 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 GABRA2P47869 451 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 MTNR1BP49286 362 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 LCN2P80188 198 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 FABP5Q01469 135 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 INSL4Q14641 139 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 ZNF146Q15072 292 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 SPIN3Q5JUX0 258 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 ELP2Q6IA86 826 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 OR4M2Q8NGB6 313 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 OR5D18Q8NGL1 313 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 TNFAIP8L1Q8WVP5 186 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 EMG1Q92979 244 aaKnown RBP14.1□□□□□ -0.15
USP39-211ENST00000465282 ORAI1Q96D31 301 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 S100A13Q99584 98 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 HMG20AQ9NP66 347 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 CTSZQ9UBR2 303 aa14.1□□□□□ -0.15
USP39-211ENST00000465282 NIPBLQ6KC79 2804 aaeCLIP14.1□□□□□ -0.15
USP39-211ENST00000465282 IGKV1-12A0A0C4DH73 117 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 TRDV1A0A1B0GX56 115 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 TRIM64CA6NLI5 447 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 PHF1O43189 567 aaPredicted RBP14.09□□□□□ -0.15
USP39-211ENST00000465282 ANGPTL7O43827 346 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 IGKV1D-12P01611 117 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 MAS1P04201 325 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 LIPFP07098 398 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 CHRM2P08172 466 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 AMY2BP19961 511 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 BCL3P20749 454 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 ZFP36P26651 326 aaKnown RBP14.09□□□□□ -0.15
USP39-211ENST00000465282 NPBWR2P48146 333 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 CAV3P56539 151 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 SEC61A1P61619 476 aaKnown RBP14.09□□□□□ -0.15
USP39-211ENST00000465282 GPR176Q14439 515 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 RNF144BQ7Z419 303 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 TEX29Q8N6K0 151 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 Q8NFD4 153 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 GAFA1Q96PS6 74 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 FAM234AQ9H0X4 552 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 LPAR2Q9HBW0 351 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 IL36GQ9NZH8 169 aa14.09□□□□□ -0.15
USP39-211ENST00000465282 LOC105371242A0A075B767 164 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 F8VVB4 439 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 F8VWA3 439 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 CD37P11049 281 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 PSMD7P51665 324 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 GP2P55259 537 aaKnown RBP14.08□□□□□ -0.16
USP39-211ENST00000465282 FGF12P61328 243 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 RSU1Q15404 277 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 NEDD8Q15843 81 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 FAM27D1Q5T7N8 215 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 DCAF12L2Q5VW00 463 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 GLT8D1Q68CQ7 371 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 LYPD6Q86Y78 171 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 JAGN1Q8N5M9 183 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 CD177Q8N6Q3 437 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 RAB40AQ8WXH6 277 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 MUL1Q969V5 352 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 FAM192AQ9GZU8 254 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 METTL9Q9H1A3 318 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 PPIL3Q9H2H8 161 aaKnown RBP14.08□□□□□ -0.16
USP39-211ENST00000465282 RBFOX1Q9NWB1 397 aaKnown RBP14.08□□□□□ -0.16
USP39-211ENST00000465282 GHRLQ9UBU3 117 aa14.08□□□□□ -0.16
USP39-211ENST00000465282 LPAR3Q9UBY5 353 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms