RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SLC18A1P54219 525 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 MRPS22P82650 360 aaKnown RBP3.35□□□□□ -1.87
UBR4-209ENST00000465036 PAX8Q06710 450 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 TFF3Q07654 80 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CD226Q15762 336 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 NDUFAF6Q330K2 333 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 MS4A18Q3C1V0 323 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CYBRD1Q53TN4 286 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 C22orf42Q6IC83 251 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 Q6ZRP5 223 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 SLC16A14Q7RTX9 510 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 HMGN2P46Q86SG4 172 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CROCCP2Q86T23 111 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 PLCZ1Q86YW0 608 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 LACC1Q8IV20 430 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 OR2M3Q8NG83 312 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 OR9I1Q8NGQ6 314 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 OR5P2Q8WZ92 322 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 MRGPRFQ96AM1 343 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 ZBED6CLQ96FA7 236 aaPredicted RBP3.35□□□□□ -1.87
UBR4-209ENST00000465036 CHMP6Q96FZ7 201 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 MS4A4EQ96PG1 132 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CNN2Q99439 309 aaKnown RBP3.35□□□□□ -1.87
UBR4-209ENST00000465036 EBF4Q9BQW3 602 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 DPY30Q9C005 99 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 SDHAF3Q9NRP4 125 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 AIG1Q9NVV5 245 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 ZNF446Q9NWS9 450 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 GIN1Q9NXP7 522 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 NKIRAS1Q9NYS0 192 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 B4GALT7Q9UBV7 327 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CLN8Q9UBY8 286 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 ENPP5Q9UJA9 477 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 ZNF229Q9UJW7 825 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 NUP50Q9UKX7 468 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 NUP214P35658 2090 aaPredicted RBP3.35□□□□□ -1.87
UBR4-209ENST00000465036 POLQO75417 2590 aa3.35□□□□□ -1.87
UBR4-209ENST00000465036 CACNA1CQ13936 2221 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR6C65A6NJZ3 312 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 MPTX1A8MV57 137 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 SLC1A7O00341 560 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 SIVA1O15304 175 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 HDAC3O15379 428 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 IDH3BO43837 385 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 AIREO43918 545 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 IFI6P09912 130 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZNF43P17038 809 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 S100A5P33763 92 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 SAA4P35542 130 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 HAAOP46952 286 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR3A2P47893 321 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 KCNJ3P48549 501 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 LHX2P50458 406 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZNF136P52737 540 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ATP5J2P56134 94 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ERVK-25P63136 954 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 LCN2P80188 198 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 RBBP4Q09028 425 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 FUT5Q11128 374 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ART3Q13508 389 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZNHIT3Q15649 155 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 TOMM34Q15785 309 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 MAPK14Q16539 360 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZNF74Q16587 644 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZNF630Q2M218 657 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 LY6G6FQ5SQ64 297 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 DCST2Q5T1A1 773 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 C9orf135Q5VTT2 229 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 TNFAIP8L2Q6P589 184 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 XKRXQ6PP77 449 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 C6orf120Q7Z4R8 191 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 TSEN54Q7Z6J9 526 aaKnown RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 IFNEQ86WN2 208 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 HOGA1Q86XE5 327 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 KIRREL3Q8IZU9 778 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 SLC7A5P1Q8MH63 180 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 LINC01561Q8N1V8 128 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 POM121L12Q8N7R1 296 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 COX18Q8N8Q8 333 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 C8orf31Q8N9H6 132 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 CDRT4Q8N9R6 151 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 LRRC75AQ8NAA5 344 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 ZSCAN4Q8NAM6 433 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR10H4Q8NGA5 316 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR8J2Q8NGG1 315 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR52I1Q8NGK6 324 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 CA5BP1Q8WTZ4 195 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 SMAP2Q8WU79 429 aaPredicted RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 PHF10Q8WUB8 498 aaKnown RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 RAB8BQ92930 207 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 TNFRSF14Q92956 283 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 CCDC124Q96CT7 223 aaKnown RBP3.34□□□□□ -1.87
UBR4-209ENST00000465036 PLEKHA8Q96JA3 519 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OPALINQ96PE5 141 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 OR7D2Q96RA2 312 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 CLCC1Q96S66 551 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 NIPSNAP3BQ9BS92 247 aa3.34□□□□□ -1.87
UBR4-209ENST00000465036 RACGAP1Q9H0H5 632 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms