RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TMEM176BQ3YBM2 270 aaPredicted RBP10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 KIAA0895LQ68EN5 471 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 SLC38A9Q8NBW4 561 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 POC1BQ8TC44 478 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 ST8SIA1Q92185 356 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 S100PBPQ96BU1 408 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 INTS12Q96CB8 462 aaKnown RBP10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 MAGT1Q9H0U3 335 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 NELFAQ9H3P2 528 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF160Q9HCG1 818 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 PARPBPQ9NWS1 579 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 ALKBH4Q9NXW9 302 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 KLRF1Q9NZS2 232 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 LIPGQ9Y5X9 500 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 ADAMTS9Q9P2N4 1935 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 K7N7A8 449 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 FASLGP48023 281 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 RND3P61587 244 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 SLC25A47Q6Q0C1 308 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 P4HA3Q7Z4N8 544 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 COMMD1Q8N668 190 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 OR2G3Q8NGZ4 309 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 PHOSPHO2Q8TCD6 241 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 PBDC1Q9BVG4 233 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 TGIF2Q9GZN2 237 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 PRO1933Q9H354 126 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 NAA60Q9H7X0 242 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 MOB1AQ9H8S9 216 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 TREM2Q9NZC2 230 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 KCNIP3Q9Y2W7 256 aa10.98□□□□□ -0.65
CLCNKA-204ENST00000464764 A0A1B0GV90 55 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 CCDC85CA6NKD9 419 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 TNFSF12O43508 249 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 TRGC2P03986 189 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 SOD3P08294 240 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 PNLIPP16233 465 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 CCL1P22362 96 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 DEFA6Q01524 100 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 CFHR1Q03591 330 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 RSPO1Q2MKA7 263 aaPredicted RBP10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 C4orf17Q53FE4 359 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 OR2AE1Q8NHA4 323 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF700Q9H0M5 742 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 GAR1Q9NY12 217 aaKnown RBP10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 FAM230AA0A1W2PPH8 454 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 RBFOX3A6NFN3 312 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 PHF1O43189 567 aaPredicted RBP10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 HEXBP07686 556 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 ATP6V0CP27449 155 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 S100A2P29034 98 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 ELOBQ15370 118 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 SPSB3Q6PJ21 355 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 TPSD1Q9BZJ3 242 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 SLC2A9Q9NRM0 540 aa10.97□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BKO60814 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BJP06899 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BOP23527 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BBP33778 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 RGS19P49795 217 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 BLKP51451 505 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BDP58876 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 UBE2KP61086 200 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BCP62807 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 DLK1P80370 383 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST2H2BEQ16778 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 PHYHD1Q5SRE7 291 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 FAM69BQ5VUD6 431 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 CYB561D1Q8N8Q1 229 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 KDF1Q8NAX2 398 aaPredicted RBP10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 TMEM171Q8WVE6 324 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BHQ93079 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BNQ99877 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 HIST1H2BMQ99879 126 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 PRDM13Q9H4Q3 707 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 CD207Q9UJ71 328 aa10.96□□□□□ -0.65
CLCNKA-204ENST00000464764 ZNF724A8MTY0 619 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 HSD17B6O14756 317 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 CYB5BO43169 146 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 MDKP21741 143 aaPredicted RBP10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 MTCP1P56278 107 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 RUNX1Q01196 453 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 EWSR1Q01844 656 aaKnown RBP eCLIP10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 C1QL4Q86Z23 238 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 DMRTC2Q8IXT2 367 aaPredicted RBP10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 C17orf78Q8N4C9 275 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 TMEM217Q8N7C4 229 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 CCDC54Q8NEL0 328 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 MSI2Q96DH6 328 aaKnown RBP10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 C14orf144Q96I85 54 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 MEGF10Q96KG7 1140 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 TP53RKQ96S44 253 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 TM2D1Q9BX74 207 aa10.96□□□□□ -0.66
CLCNKA-204ENST00000464764 IGHV3-15A0A0B4J1V0 119 aa10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 ST8SIA3O43173 380 aa10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 CST7O76096 145 aa10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 AFF3P51826 1226 aaKnown RBP10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 CLDN17P56750 224 aa10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 GAMTQ14353 236 aa10.95□□□□□ -0.66
CLCNKA-204ENST00000464764 SNAI3Q3KNW1 292 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms