RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 DLGAP1O14490 977 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 ARPC2O15144 300 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 DHRS3O75911 302 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 HSD17B1P14061 328 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 MPZP25189 248 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 PEX2P28328 305 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 RAB25P57735 213 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 PPP1R8Q12972 351 aaKnown RBP11.48□□□□□ -0.57
SMC1A-204ENST00000463684 IL24Q13007 206 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 MICAQ29983 383 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 OR52W1Q6IF63 320 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 DEGS2Q6QHC5 323 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 TCF23Q7RTU1 214 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 RTN4RL2Q86UN3 420 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 ANGPTL5Q86XS5 388 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 KLHL30-AS1Q8NEE0 82 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 Q8NFD4 153 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF596Q8TC21 504 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 CHPT1Q8WUD6 406 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 PRR25Q96S07 402 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 P2RX4Q99571 388 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 MROQ9BYG7 248 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 PKIBQ9C010 78 aa11.48□□□□□ -0.57
SMC1A-204ENST00000463684 PRODHO43272 600 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 ALOX5APP20292 161 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 CEACAM3P40198 252 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 OR3A4PP47883 348 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 HCCSP53701 268 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 RPS7P62081 194 aaKnown RBP11.47□□□□□ -0.57
SMC1A-204ENST00000463684 BDH1Q02338 343 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 GRK1Q15835 563 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 SLX4IPQ5VYV7 408 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 C18orf65Q6ZTR6 163 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 IQCF1Q8N6M8 205 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 TPRX1Q8N7U7 411 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 CREB3L1Q96BA8 519 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 CDRT15Q96T59 188 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 DNAJB9Q9UBS3 223 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 HHLA2Q9UM44 414 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 RYR2Q92736 4967 aa11.47□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF254O75437 659 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 IGLV3-1P01715 115 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 FAM106CPP0CH98 169 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 LYL1P12980 280 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 GABRR1P24046 479 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 MNDAP41218 407 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF829Q3KNS6 432 aaPredicted RBP11.46□□□□□ -0.57
SMC1A-204ENST00000463684 SLC35D3Q5M8T2 416 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 TMEM42Q69YG0 159 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 ZNF695Q8IW36 515 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 CEP19Q96LK0 163 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 PALMDQ9NP74 551 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 NUFIP1Q9UHK0 495 aaKnown RBP11.46□□□□□ -0.57
SMC1A-204ENST00000463684 GLS2Q9UI32 602 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 GTF2A1LQ9UNN4 478 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 SLC7A11Q9UPY5 501 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 U3KQV3 271 aa11.46□□□□□ -0.57
SMC1A-204ENST00000463684 EPPK1P58107 5090 aaKnown RBP11.45□□□□□ -0.58
SMC1A-204ENST00000463684 FAM230AA0A1W2PPH8 454 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 TMEM82A0PJX8 343 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 ARRDC5A6NEK1 342 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 SERPINE3A8MV23 424 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 CCL24O00175 119 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 TOR1AO14656 332 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 MMP23AO75900 390 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 CHATP28329 748 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 ECI1P42126 302 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 SLC35B1P78383 322 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 C9orf66Q5T8R8 295 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 CCDC144NLQ6NUI1 221 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 CD300LDQ6UXZ3 194 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 EGFL6Q8IUX8 553 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 OR5M8Q8NGP6 311 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 TRMT10AQ8TBZ6 339 aaKnown RBP11.45□□□□□ -0.58
SMC1A-204ENST00000463684 DUX3Q96PT4 197 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 NIPSNAP1Q9BPW8 284 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 YIPF3Q9GZM5 350 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 CHST6Q9GZX3 395 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 GAL3ST2Q9H3Q3 398 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 REEP1Q9H902 201 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 MTCH1Q9NZJ7 389 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 UBE2J1Q9Y385 318 aaPredicted RBP11.45□□□□□ -0.58
SMC1A-204ENST00000463684 MOB4Q9Y3A3 225 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 SAMHD1Q9Y3Z3 626 aaKnown RBP11.45□□□□□ -0.58
SMC1A-204ENST00000463684 HSPE1-MOB4S4R3N1 261 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 BIRC6Q9NR09 4857 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 TENM2Q9NT68 2774 aa11.45□□□□□ -0.58
SMC1A-204ENST00000463684 A6NIN4 97 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 E2F6O75461 281 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 INMTO95050 263 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 HAND1O96004 215 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 IGLV1-47P01700 117 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 TTRP02766 147 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 PRDX6P30041 224 aa11.44□□□□□ -0.58
SMC1A-204ENST00000463684 LUMP51884 338 aaPredicted RBP11.44□□□□□ -0.58
SMC1A-204ENST00000463684 RIDAP52758 137 aaKnown RBP11.44□□□□□ -0.58
SMC1A-204ENST00000463684 PRRX1P54821 245 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms