RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TMEM106AQ96A25 262 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 RFT1Q96AA3 541 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 ZNF184Q99676 751 aaPredicted RBP14.61□□□□□ -0.07
VPS52-214ENST00000463486 DCTN5Q9BTE1 182 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 SEBOXQ9HB31 216 aaPredicted RBP14.61□□□□□ -0.07
VPS52-214ENST00000463486 TAS2R4Q9NYW5 299 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 IL36RNQ9UBH0 155 aa14.61□□□□□ -0.07
VPS52-214ENST00000463486 DENRO43583 198 aaKnown RBP14.6□□□□□ -0.07
VPS52-214ENST00000463486 SPRY1O43609 319 aaPredicted RBP14.6□□□□□ -0.07
VPS52-214ENST00000463486 INMTO95050 263 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 KNG1P01042 644 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 LIPFP07098 398 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 OCM2P0CE71 109 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 IGFBP3P17936 291 aaPredicted RBP14.6□□□□□ -0.07
VPS52-214ENST00000463486 CELP19835 753 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 BCL3P20749 454 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 GABRA2P47869 451 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 CAV3P56539 151 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 FGF12P61328 243 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 SPHARQ15513 63 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 KISS1Q15726 138 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 BTNL3Q6UXE8 466 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 MKXQ8IYA7 352 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 TEX29Q8N6K0 151 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 NANPQ8TBE9 248 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 MND1Q9BWT6 205 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 SIRPDQ9H106 197 aa14.6□□□□□ -0.07
VPS52-214ENST00000463486 RBFOX1Q9NWB1 397 aaKnown RBP14.6□□□□□ -0.07
VPS52-214ENST00000463486 SLC25A10Q9UBX3 287 aaPredicted RBP14.6□□□□□ -0.07
VPS52-214ENST00000463486 NKX6-3A6NJ46 265 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 ZNF879B4DU55 563 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 PIN1P1O15428 100 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 RGS10O43665 173 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 ANGPTL7O43827 346 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 ZNF737O75373 536 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 KDM4BO94953 1096 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 IFNA2P01563 188 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 IGHV4-38-2P0DP08 117 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 POU3F4P49335 361 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 Q499Y3 187 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 LRRC10Q5BKY1 277 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 RBM48Q5RL73 367 aaKnown RBP14.59□□□□□ -0.07
VPS52-214ENST00000463486 PRSS48Q7RTY5 328 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 OR52N4Q8NGI2 321 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 DMRTB1Q96MA1 342 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 TBX15Q96SF7 602 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 MRI1Q9BV20 369 aa14.59□□□□□ -0.07
VPS52-214ENST00000463486 TRAV8-7A0A075B6U6 113 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 PNMA8CA0A1B0GUJ8 204 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 ALDOBP05062 364 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 CD2P06729 351 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 SFTPBP07988 381 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 RAB3AP20336 220 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 EPHA1P21709 976 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 GP2P55259 537 aaKnown RBP14.58□□□□□ -0.08
VPS52-214ENST00000463486 ZNF146Q15072 292 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 UNQ9370/PRO34162Q6UXP9 181 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 ASCL4Q6XD76 172 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 LYPD6Q86Y78 171 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 SAXO1Q8IYX7 474 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 ZNF561Q8N587 486 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 PNLDC1Q8NA58 520 aaKnown RBP14.58□□□□□ -0.08
VPS52-214ENST00000463486 OR5D18Q8NGL1 313 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 OR14A2Q96R54 314 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 CNTD2Q9H8S5 307 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 ELL3Q9HB65 397 aaPredicted RBP14.58□□□□□ -0.08
VPS52-214ENST00000463486 HMG20AQ9NP66 347 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 STAB1Q9NY15 2570 aa14.58□□□□□ -0.08
VPS52-214ENST00000463486 TMEM82A0PJX8 343 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 MAGEA13PA6NCF6 341 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 ARF6P62330 175 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 INSL4Q14641 139 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 Q8IYB0 196 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 FAM58AQ8N1B3 248 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 Q8N7P7 452 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 ZSCAN4Q8NAM6 433 aaPredicted RBP14.57□□□□□ -0.08
VPS52-214ENST00000463486 Q8NFD4 153 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 WDFY2Q96P53 400 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 DERL3Q96Q80 235 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 NKX3-1Q99801 234 aaPredicted RBP14.57□□□□□ -0.08
VPS52-214ENST00000463486 ZNF69Q9UC07 566 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 OR14J1Q9UGF5 321 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 NUP50Q9UKX7 468 aa14.57□□□□□ -0.08
VPS52-214ENST00000463486 SOX21Q9Y651 276 aaPredicted RBP14.57□□□□□ -0.08
VPS52-214ENST00000463486 A0A1W2PPK0 400 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 K7N7A8 449 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 GABRPO00591 440 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 SC5DO75845 299 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 TK1P04183 234 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 HCKP08631 526 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 CALCBP10092 127 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 FSTP19883 344 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 MAP2K4P45985 399 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 SRSF2Q01130 221 aaKnown RBP14.56□□□□□ -0.08
VPS52-214ENST00000463486 COL10A1Q03692 680 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 GPR50Q13585 617 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 TPBGQ13641 420 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 C17orf107Q6ZR85 190 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 C9orf139Q6ZV77 190 aa14.56□□□□□ -0.08
VPS52-214ENST00000463486 BCL6BQ8N143 479 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms