RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 NSUN5P2Q63ZY6 315 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 LYG2Q86SG7 212 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 LHFPL1Q86WI0 220 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 ZNF610Q8N9Z0 462 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 SCNM1Q9BWG6 230 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 LIME1Q9H400 295 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 OSGIN2Q9Y236 505 aa10.98□□□□□ -0.65
VAPB-203ENST00000463370 NOP16Q9Y3C1 178 aaKnown RBP10.98□□□□□ -0.65
VAPB-203ENST00000463370 SVILO95425 2214 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 OR7C1O76099 320 aaPredicted RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 CGAP01215 116 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 IL2RAP01589 272 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 CXCL2P19875 107 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 VAMP1P23763 118 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 CHRFAM7AQ494W8 412 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 CXorf67Q86X51 503 aaPredicted RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 CASTOR1Q8WTX7 329 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 MARS2Q96GW9 593 aaKnown RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 CMSS1Q9BQ75 279 aaKnown RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 RTBDNQ9BSG5 229 aaPredicted RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 PPA2Q9H2U2 334 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 PRR13Q9NZ81 148 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 GPR132Q9UNW8 380 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 FAM215AQ9Y5M1 114 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 PLSCR5A0PG75 271 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 FCGR3AP08637 254 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 DUSP1P28562 367 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 CD34P28906 385 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 TAS2R46P59540 309 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 IL13RA1P78552 427 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 HAGHLQ6PII5 290 aaPredicted RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 Q8NFD4 153 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 MRPS24Q96EL2 167 aaKnown RBP10.97□□□□□ -0.65
VAPB-203ENST00000463370 TMPRSS13Q9BYE2 586 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 PLSCR4Q9NRQ2 329 aa10.97□□□□□ -0.65
VAPB-203ENST00000463370 IGHV3-64DA0A0J9YX35 117 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 ANKRD30BLA7E2S9 258 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 CEACAM18A8MTB9 384 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 PDCD6O75340 191 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 MPC2O95563 127 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 GLRA1P23415 457 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 EIF2S3P41091 472 aaKnown RBP10.96□□□□□ -0.65
VAPB-203ENST00000463370 PER3P56645 1201 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 PPP1CBP62140 327 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 ARL6IP1Q15041 203 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 PPA1Q15181 289 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 PEG10Q86TG7 708 aaKnown RBP10.96□□□□□ -0.65
VAPB-203ENST00000463370 OR5A2Q8NGI9 324 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 OR5L1Q8NGL2 311 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 OPA3Q9H6K4 179 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 ANXA10Q9UJ72 324 aa10.96□□□□□ -0.65
VAPB-203ENST00000463370 MBD3L4A6NDZ8 208 aaPredicted RBP10.96□□□□□ -0.66
VAPB-203ENST00000463370 MBD3L3A6NE82 208 aaPredicted RBP10.96□□□□□ -0.66
VAPB-203ENST00000463370 MBD3L5A6NJ08 208 aaPredicted RBP10.96□□□□□ -0.66
VAPB-203ENST00000463370 NOS1APO75052 506 aaPredicted RBP10.96□□□□□ -0.66
VAPB-203ENST00000463370 WDR1O75083 606 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 RHBDL1O75783 438 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 OR2A2Q6IF42 318 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 WDR86Q86TI4 376 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 OR5M8Q8NGP6 311 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 MBD3L2Q8NHZ7 208 aaPredicted RBP10.96□□□□□ -0.66
VAPB-203ENST00000463370 SLC25A40Q8TBP6 338 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 MITD1Q8WV92 249 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 ELMOD3Q96FG2 381 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 ABHD17AQ96GS6 310 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 CDH20Q9HBT6 801 aa10.96□□□□□ -0.66
VAPB-203ENST00000463370 CNOT4O95628 575 aaKnown RBP10.95□□□□□ -0.66
VAPB-203ENST00000463370 IGKV3-15P01624 115 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 FPR2P25090 351 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 ARPC4P59998 168 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 SUPT4H1P63272 117 aaKnown RBP10.95□□□□□ -0.66
VAPB-203ENST00000463370 DHODHQ02127 395 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 MPPED2Q15777 294 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 GRK1Q15835 563 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 INO80CQ6PI98 192 aaPredicted RBP10.95□□□□□ -0.66
VAPB-203ENST00000463370 FBXW12Q6X9E4 464 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 SPACA3Q8IXA5 215 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 C17orf78Q8N4C9 275 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 SEC22AQ96IW7 307 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 HIST1H2AAQ96QV6 131 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 ZNF71Q9NQZ8 489 aaPredicted RBP10.95□□□□□ -0.66
VAPB-203ENST00000463370 ZZEF1O43149 2961 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 TRAV14DV4A0A0A6YYC5 116 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 HSPB6O14558 160 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 PPP3CBP16298 524 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 SELEP16581 610 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 FUT3P21217 361 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 MPV17P39210 176 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 UCP2P55851 309 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 FGF12P61328 243 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 SORDQ00796 357 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 ZNF660Q6AZW8 331 aaPredicted RBP10.95□□□□□ -0.66
VAPB-203ENST00000463370 ELP2Q6IA86 826 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 TMEM200AQ86VY9 491 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 OR8H1Q8NGG4 311 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 OR1J1Q8NGS3 322 aa10.95□□□□□ -0.66
VAPB-203ENST00000463370 ZNF2Q9BSG1 426 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms