RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 OR5B21A6NL26 309 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 RFPL4AA6NLU0 287 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 RFPL4AL1F8VTS6 287 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 CHST1O43916 411 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 FBXO24O75426 580 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 ZNF254O75437 659 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 APOL3O95236 402 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 DBTP11182 482 aaKnown RBP16.03■□□□□ 0.16
VARS-221ENST00000463184 ATP6V1B1P15313 513 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 PAX6P26367 422 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 TMEM200BQ69YZ2 307 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 ACP7Q6ZNF0 438 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 ZNF679Q8IYX0 411 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 ZNF561Q8N587 486 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 OR10H4Q8NGA5 316 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 CNIH3Q8TBE1 160 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 MRAPQ8TCY5 172 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 LGALS12Q96DT0 336 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 CDCA4Q9BXL8 241 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 AMBNQ9NP70 447 aa16.03■□□□□ 0.16
VARS-221ENST00000463184 MRPS18AQ9NVS2 196 aaKnown RBP16.03■□□□□ 0.16
VARS-221ENST00000463184 MEGF11A6BM72 1044 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 VGLL3A8MV65 326 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 J3QRE1 110 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 SLC1A7O00341 560 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 BMXP51813 675 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 LOXL3P58215 753 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 ACTC1P68032 377 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 ACTA1P68133 377 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 RAB40BQ12829 278 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 SMIM21Q3B7S5 101 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 NSUN5P1Q3KNT7 163 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 KLHL22Q53GT1 634 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 OXLD1Q5BKU9 147 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 HAGHLQ6PII5 290 aaPredicted RBP16.02■□□□□ 0.16
VARS-221ENST00000463184 MOB3CQ70IA8 216 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 Q8N2B8 174 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 CD177Q8N6Q3 437 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 TBX5Q99593 518 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 NKX3-1Q99801 234 aaPredicted RBP16.02■□□□□ 0.16
VARS-221ENST00000463184 IKZF2Q9UKS7 526 aa16.02■□□□□ 0.16
VARS-221ENST00000463184 A0A1W2PQL4 384 aaPredicted RBP16.01■□□□□ 0.15
VARS-221ENST00000463184 PRR32B1ATL7 298 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 FADS2O95864 444 aaKnown RBP16.01■□□□□ 0.15
VARS-221ENST00000463184 PRDX2P32119 198 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 RIDAP52758 137 aaKnown RBP16.01■□□□□ 0.15
VARS-221ENST00000463184 ERVFRD-1P60508 538 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 RIPPLY1Q0D2K3 151 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 SMN1Q16637 294 aaKnown RBP16.01■□□□□ 0.15
VARS-221ENST00000463184 ZBTB37Q5TC79 503 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 NDUFA11Q86Y39 141 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 CALHM1Q8IU99 346 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 LYG1Q8N1E2 194 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 POC1AQ8NBT0 407 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 OR4F17Q8NGA8 305 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 FBLIM1Q8WUP2 373 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 OR4F4Q96R69 305 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 TTTY10Q9BZA0 68 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 ZNF702PQ9H963 129 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 SERTAD4Q9NUC0 356 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 NECAP2Q9NVZ3 263 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 NOTCH3Q9UM47 2321 aa16.01■□□□□ 0.15
VARS-221ENST00000463184 TMEM269A0A1B0GVZ9 245 aa16■□□□□ 0.15
VARS-221ENST00000463184 FAM90A8PA6NJQ4 464 aa16■□□□□ 0.15
VARS-221ENST00000463184 PSMD9O00233 223 aa16■□□□□ 0.15
VARS-221ENST00000463184 CD28P10747 220 aa16■□□□□ 0.15
VARS-221ENST00000463184 COX7A1P24310 79 aa16■□□□□ 0.15
VARS-221ENST00000463184 DMRTC1Q5HYR2 192 aa16■□□□□ 0.15
VARS-221ENST00000463184 PLCXD3Q63HM9 321 aa16■□□□□ 0.15
VARS-221ENST00000463184 SSX6Q7RTT6 188 aa16■□□□□ 0.15
VARS-221ENST00000463184 ACBD7Q8N6N7 88 aa16■□□□□ 0.15
VARS-221ENST00000463184 OR4M1Q8NGD0 313 aa16■□□□□ 0.15
VARS-221ENST00000463184 SGCDQ92629 289 aa16■□□□□ 0.15
VARS-221ENST00000463184 MMP28Q9H239 520 aa16■□□□□ 0.15
VARS-221ENST00000463184 FAM206AQ9NX38 181 aa16■□□□□ 0.15
VARS-221ENST00000463184 DAPL1A0PJW8 107 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 IRGMA1A4Y4 181 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 NOS1APO75052 506 aaPredicted RBP15.99■□□□□ 0.15
VARS-221ENST00000463184 SULT1C4O75897 302 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 KRT8P05787 483 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 CCL3L1P16619 93 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 ZNF85Q03923 595 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 ZNF829Q3KNS6 432 aaPredicted RBP15.99■□□□□ 0.15
VARS-221ENST00000463184 ZNF684Q5T5D7 378 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 PLEKHG7Q6ZR37 379 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 LHFPL4Q7Z7J7 247 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 COMMD2Q86X83 199 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 R3HDM4Q96D70 268 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 MYCBPQ99417 103 aaPredicted RBP15.99■□□□□ 0.15
VARS-221ENST00000463184 ANKRD60Q9BZ19 345 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 INPP5EQ9NRR6 644 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 MRM2Q9UI43 246 aaKnown RBP15.99■□□□□ 0.15
VARS-221ENST00000463184 ENPP5Q9UJA9 477 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 RAB26Q9ULW5 256 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 TCF19Q9Y242 345 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 PIGLQ9Y2B2 252 aa15.99■□□□□ 0.15
VARS-221ENST00000463184 METTL15A6NJ78 407 aa15.98■□□□□ 0.15
VARS-221ENST00000463184 MAGEB4O15481 346 aaPredicted RBP15.98■□□□□ 0.15
VARS-221ENST00000463184 NRASP01111 189 aa15.98■□□□□ 0.15
VARS-221ENST00000463184 IGLV3-1P01715 115 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms