RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PCDHB16Q9NRJ7 776 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 TMEM106BQ9NUM4 274 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 RASL12Q9NYN1 266 aa12.06□□□□□ -0.48
COL6A1-202ENST00000463060 A0A0A6YYD4 124 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 FOXI3A8MTJ6 420 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-202ENST00000463060 HPGDSO60760 199 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 LY6HO94772 140 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 FSTL3O95633 263 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 MPIG6BO95866 241 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 APOA1P02647 267 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 EIF4EP06730 217 aaKnown RBP12.05□□□□□ -0.48
COL6A1-202ENST00000463060 GTF2F2P13984 249 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 ELK1P19419 428 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 SERPINA2P20848 420 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 TNFSF8P32971 234 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 ART1P52961 327 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 ACP7Q6ZNF0 438 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A1Q86YD7 464 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 CMTM4Q8IZR5 234 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 SAMD12Q8N8I0 201 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 OR11L1Q8NGX0 322 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 RDH5Q92781 318 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 SEH1LQ96EE3 360 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 SOSTQ9BQB4 213 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 ELL3Q9HB65 397 aaPredicted RBP12.05□□□□□ -0.48
COL6A1-202ENST00000463060 DLL4Q9NR61 685 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 RHBDL2Q9NX52 303 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 TREM2Q9NZC2 230 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 IL36RNQ9UBH0 155 aa12.05□□□□□ -0.48
COL6A1-202ENST00000463060 hCG_1807616A0A1W2PRN6 198 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 LYNX1G3V0Z9 82 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 TNFRSF13BO14836 293 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 CRTAPO75718 401 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 CSTBP04080 98 aaKnown RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 LYNX1P0DP58 116 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 DAOP14920 347 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 RBM11P57052 281 aaKnown RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF146Q15072 292 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 UBE2NLQ5JXB2 153 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 FAM201AQ5SY85 155 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 SIGIRRQ6IA17 410 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 CCDC190Q86UF4 302 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 LAX1Q8IWV1 398 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 BATF2Q8N1L9 274 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 RAB40AQ8WXH6 277 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 HPS1Q92902 700 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 FAM46BQ96A09 425 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 TMEM59Q9BXS4 323 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 SELENOIQ9C0D9 397 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 C6orf62Q9GZU0 229 aaPredicted RBP12.04□□□□□ -0.48
COL6A1-202ENST00000463060 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 PEX16Q9Y5Y5 336 aa12.04□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A10PA6NDY2 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A18PA6NE21 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A16PA6NEW6 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A20PA6NIJ5 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A8PA6NJQ4 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A7PA6NKC0 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A22PA8MWA6 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A12PA8MX19 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A5PA8MXJ8 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A23PA8MXZ1 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 RAB27BO00194 218 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 NXPH2O95156 264 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 IGHV4-39P01824 125 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 GLRA1P23415 457 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 TMEM50BP56557 158 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 IL13RA2Q14627 380 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 HFEQ30201 348 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 PIGYQ3MUY2 71 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 Q6P435 159 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 LRRC28Q86X40 367 aaPredicted RBP12.03□□□□□ -0.48
COL6A1-202ENST00000463060 CCL17Q92583 94 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 EMG1Q92979 244 aaKnown RBP12.03□□□□□ -0.48
COL6A1-202ENST00000463060 NICN1Q9BSH3 213 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF581Q9P0T4 197 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 ST3GAL6Q9Y274 331 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 NPTNQ9Y639 398 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
COL6A1-202ENST00000463060 ABCA12Q86UK0 2595 aa12.02□□□□□ -0.48
COL6A1-202ENST00000463060 IGKV1D-17A0A075B6S4 117 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 LRRC30A6NM36 301 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 LGALS8O00214 317 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 GEMIN2O14893 280 aaKnown RBP12.02□□□□□ -0.49
COL6A1-202ENST00000463060 SOCS1O15524 211 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 RGS5O15539 181 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 KNG1P01042 644 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 CHRM2P08172 466 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 PSG2P11465 335 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 PRKACAP17612 351 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 AMY2BP19961 511 aa12.02□□□□□ -0.49
COL6A1-202ENST00000463060 LMO1P25800 156 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms