RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 C20orf24Q9BUV8 137 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 ANGPTL4Q9BY76 406 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 DEFB126Q9BYW3 111 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 ULBP2Q9BZM5 246 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 PARP12Q9H0J9 701 aaKnown RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 DUSP15Q9H1R2 295 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 CHRDQ9H2X0 955 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 OPA3Q9H6K4 179 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 WFDC1Q9HC57 220 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 SIRT7Q9NRC8 400 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 GSN-AS1Q9NRJ2 163 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 SLC2A9Q9NRM0 540 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 DECR2Q9NUI1 292 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 PLEK2Q9NYT0 353 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 IL36GQ9NZH8 169 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 PLA2G2EQ9NZK7 142 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF319Q9P2F9 582 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 MIOXQ9UGB7 285 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF391Q9UJN7 358 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 FOXD3Q9UJU5 478 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 DKKL1Q9UK85 242 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 NXT1Q9UKK6 140 aaKnown RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 LHX6Q9UPM6 363 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 SLC7A11Q9UPY5 501 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 PTRH2Q9Y3E5 179 aaKnown RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 FBXO7Q9Y3I1 522 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 TMED3Q9Y3Q3 217 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 DMRT1Q9Y5R6 373 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 B3GALT1Q9Y5Z6 326 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 PUS1Q9Y606 427 aaKnown RBP eCLIP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 MTCH2Q9Y6C9 303 aa3.07□□□□□ -1.92
COL8A1-204ENST00000462604 NUP214P35658 2090 aaPredicted RBP3.07□□□□□ -1.92
COL8A1-204ENST00000462604 IGKV1D-8A0A087WSZ0 117 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ELOA3CA0A087WX78 387 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TRAV20A0A0B4J274 112 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 C3orf85A0A1B0GTC6 90 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 A0A1B0GV50 99 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 A0A1W2PPE3 182 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 DUXBA0A1W2PPF3 345 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FAM221AA4D161 298 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 C5orf63A6NC05 138 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 CXorf65A6NEN9 183 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RBFOX3A6NFN3 312 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 C2CD4DB7Z1M9 353 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ZNF814B7Z6K7 855 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TRDCB7Z8K6 153 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 LINC01387J3KSC0 135 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 K7ESF4 209 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 K7N7A8 449 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MASP2O00187 686 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MSTNO14793 375 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 YKT6O15498 198 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 EFNA2O43921 213 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RAMP1O60894 148 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SCRG1O75711 98 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 C1QL1O75973 258 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR2J2O76002 312 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 DFFBO76075 338 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NRASP01111 189 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 IFNA1P01562 189 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 IGHV2-5P01817 119 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 LCATP04180 440 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 ARG1P05089 322 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 CST2P09228 141 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MMP9P14780 707 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 DAOP14920 347 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RAC2P15153 192 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 EN2P19622 333 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TCN2P20062 427 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 AADACP22760 399 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 LMO1P25800 156 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 S100GP29377 79 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OTX1P32242 354 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OPRM1P35372 400 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MAS1LP35410 378 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 PPP1CCP36873 323 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TAGLN2P37802 199 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NKX2-1P43699 371 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RPS10P46783 165 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HTR5AP47898 357 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RGS19P49795 217 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RBP2P50120 134 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 FUT6P51993 359 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RBM11P57052 281 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 OR2B8PP59922 312 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 UBE2KP61086 200 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 PCBD1P61457 104 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RND3P61587 244 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 RPS23P62266 143 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 HIST1H3AP68431 136 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 NKX6-1P78426 367 aaPredicted RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 MRPS34P82930 218 aaKnown RBP3.06□□□□□ -1.92
COL8A1-204ENST00000462604 CFHR1Q03591 330 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 TLE4Q04727 773 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 BAXQ07812 192 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SPEM2Q0P670 501 aa3.06□□□□□ -1.92
COL8A1-204ENST00000462604 SHHQ15465 462 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms