RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 C18orf12Q96KH6 178 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 ABCA7Q8IZY2 2146 aa16.07■□□□□ 0.16
HPS3-204ENST00000462030 CCDC187A0A096LP49 1063 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 NSG1A0A0A6YYJ2 146 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 CSNK1A1P48729 337 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 NOVA1P51513 510 aaKnown RBP16.06■□□□□ 0.16
HPS3-204ENST00000462030 MTCP1P56278 107 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 STARD6P59095 220 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 LSM6P62312 80 aaKnown RBP16.06■□□□□ 0.16
HPS3-204ENST00000462030 GPR157Q5UAW9 335 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 LIAT1Q6ZQX7 453 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 GJC3Q8NFK1 279 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 TSTD1Q8NFU3 115 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 AKR7LQ8NHP1 331 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 SLC22A8Q8TCC7 542 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 BCL2L14Q9BZR8 327 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 TGIF2Q9GZN2 237 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 SLC2A9Q9NRM0 540 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 STRAPQ9Y3F4 350 aaKnown RBP16.06■□□□□ 0.16
HPS3-204ENST00000462030 B3GALT1Q9Y5Z6 326 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 PUS1Q9Y606 427 aaKnown RBP eCLIP16.06■□□□□ 0.16
HPS3-204ENST00000462030 SHANK1Q9Y566 2161 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 IGLV3-32A0A0A0MS00 114 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 PBDC1Q9BVG4 233 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 NELFAQ9H3P2 528 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 HDGFL3Q9Y3E1 203 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 PRUNE2Q8WUY3 3088 aa16.06■□□□□ 0.16
HPS3-204ENST00000462030 K7N7A8 449 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 M0R135 149 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 GPR37O15354 613 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 CLINT1Q14677 625 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 NAXEQ8NCW5 288 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 OR2AE1Q8NHA4 323 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 NABP1Q96AH0 204 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 MSI2Q96DH6 328 aaKnown RBP16.05■□□□□ 0.16
HPS3-204ENST00000462030 ZNF799Q96GE5 643 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 YPEL4Q96NS1 127 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 SPSB2Q99619 263 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 CNTRLQ7Z7A1 2325 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 ASCC3Q8N3C0 2202 aaKnown RBP16.05■□□□□ 0.16
HPS3-204ENST00000462030 TIAF1O95411 115 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 DUSP1P28562 367 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 RAB5CP51148 216 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 LRTM2Q8N967 370 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 MYOTQ9UBF9 498 aa16.05■□□□□ 0.16
HPS3-204ENST00000462030 IGKV1-27A0A075B6S5 117 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 IGHV3-15A0A0B4J1V0 119 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 FAM230AA0A1W2PPH8 454 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 ST8SIA3O43173 380 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 TLX3O43711 291 aaPredicted RBP16.04■□□□□ 0.16
HPS3-204ENST00000462030 OR2C1O95371 312 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 CHATP28329 748 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 GUCA1AP43080 201 aaPredicted RBP16.04■□□□□ 0.16
HPS3-204ENST00000462030 CCL20P78556 96 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 IL13RA2Q14627 380 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 RSU1Q15404 277 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 PRAMEF20Q5VT98 475 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 RHBDD2Q6NTF9 364 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 SLC22A25Q6T423 547 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 CARFQ8N187 725 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 WDSUB1Q8N9V3 476 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 ABHD14AQ9BUJ0 271 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 SUCNR1Q9BXA5 334 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 METTL9Q9H1A3 318 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 CFAP54Q96N23 3096 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 C2CD4DB7Z1M9 353 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 PIAS2O75928 621 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 RD3LP0DJH9 198 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 ITGA3P26006 1051 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 SGK3Q96BR1 496 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 ZNF385AQ96PM9 386 aaKnown RBP16.04■□□□□ 0.16
HPS3-204ENST00000462030 CHRDQ9H2X0 955 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 SEMA5BQ9P283 1151 aa16.04■□□□□ 0.16
HPS3-204ENST00000462030 CABIN1Q9Y6J0 2220 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 IGLV3-12A0A075B6K2 115 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 YIF1AO95070 293 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 PNLIPP16233 465 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 OTX1P32242 354 aaPredicted RBP16.03■□□□□ 0.16
HPS3-204ENST00000462030 LTBRP36941 435 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 SOHLH1Q5JUK2 328 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 HEPN1Q6WQI6 88 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 Q6ZSR3 168 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 SYT13Q7L8C5 426 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 SUMF2Q8NBJ7 301 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 TMPRSS5Q9H3S3 457 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 PLEK2Q9NYT0 353 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 PHF1O43189 567 aaPredicted RBP16.03■□□□□ 0.16
HPS3-204ENST00000462030 NXPH1P58417 271 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 RAB1AP62820 205 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 EWSR1Q01844 656 aaKnown RBP eCLIP16.03■□□□□ 0.16
HPS3-204ENST00000462030 PIGYQ3MUY2 71 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 NKAIN1Q4KMZ8 207 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 RBM24Q9BX46 236 aaKnown RBP16.03■□□□□ 0.16
HPS3-204ENST00000462030 HSF4Q9ULV5 492 aa16.03■□□□□ 0.16
HPS3-204ENST00000462030 CDRT15L2A8MXV6 281 aa16.02■□□□□ 0.16
HPS3-204ENST00000462030 IFNA17P01571 189 aa16.02■□□□□ 0.16
HPS3-204ENST00000462030 DTYMKP23919 212 aa16.02■□□□□ 0.16
HPS3-204ENST00000462030 MAS1LP35410 378 aa16.02■□□□□ 0.16
HPS3-204ENST00000462030 MEX3BQ6ZN04 569 aaKnown RBP16.02■□□□□ 0.16
HPS3-204ENST00000462030 HIST2H3AQ71DI3 136 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms