RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PQLC2LA1A4F0 135 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 FUOMA2VDF0 154 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 H3BUX3 64 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 MAGEB3O15480 346 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 SYNGR1O43759 233 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 MPZL2O60487 215 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 APOL3O95236 402 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TFF1P04155 84 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TK1P04183 234 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 GNAO1P09471 354 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 PIPP12273 146 aaPredicted RBP7.27□□□□□ -1.25
LDB1-203ENST00000461873 GABRR1P24046 479 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 COX7A1P24310 79 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 GABRA5P31644 462 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 POU3F4P49335 361 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 MTCP1P56278 107 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 OR12D2P58182 307 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 PRB3Q04118 309 aaPredicted RBP7.27□□□□□ -1.25
LDB1-203ENST00000461873 EDDM3AQ14507 147 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TUSC1Q2TAM9 212 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TP53I3Q53FA7 332 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 C11orf88Q6PI97 169 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 KRT74Q7RTS7 529 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TRAPPC6BQ86SZ2 158 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 CATSPERDQ86XM0 798 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 ANGPTL5Q86XS5 388 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 CALHM1Q8IU99 346 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 ZNF676Q8N7Q3 588 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 OR2T6Q8NHC8 308 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 TAF15Q92804 592 aaKnown RBP eCLIP7.27□□□□□ -1.25
LDB1-203ENST00000461873 RNFT2Q96EX2 444 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 CPNE2Q96FN4 548 aaPredicted RBP7.27□□□□□ -1.25
LDB1-203ENST00000461873 CNBD2Q96M20 576 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 NKX3-1Q99801 234 aaPredicted RBP7.27□□□□□ -1.25
LDB1-203ENST00000461873 GABARAPL3Q9BY60 117 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 VCXQ9H320 206 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 FAM118AQ9NWS6 357 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 PITPNC1Q9UKF7 332 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 MAB21L2Q9Y586 359 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 GMPPBQ9Y5P6 360 aa7.27□□□□□ -1.25
LDB1-203ENST00000461873 LOC107986453A0A1B0GWG9 222 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 hADV38S2A0JD32 116 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 J3QLW9 94 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 NOS1APO75052 506 aaPredicted RBP7.26□□□□□ -1.25
LDB1-203ENST00000461873 IGLV3-1P01715 115 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 ARG1P05089 322 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 ZNF19P17023 458 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 AMY2BP19961 511 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 ADARB1P78563 741 aaKnown RBP7.26□□□□□ -1.25
LDB1-203ENST00000461873 COL10A1Q03692 680 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 LY6EQ16553 131 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 TAF9Q16594 264 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 C2orf68Q2NKX9 166 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 LRRC75BQ2VPJ9 315 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 TMEM200BQ69YZ2 307 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 LIAT1Q6ZQX7 453 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 LHFPL2Q6ZUX7 228 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 SLC25A26Q70HW3 274 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 PNKDQ8N490 385 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 ACBD7Q8N6N7 88 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 CD177Q8N6Q3 437 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 PACRGLQ8N7B6 248 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 Q8N7P7 452 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 BEND2Q8NDZ0 799 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 ZNF555Q8NEP9 628 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 OR13C3Q8NGS6 347 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 WFDC12Q8WWY7 111 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 RORBQ92753 470 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 SLAMF9Q96A28 289 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 FOXRED1Q96CU9 486 aaPredicted RBP7.26□□□□□ -1.25
LDB1-203ENST00000461873 SNX22Q96L94 193 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 NRIP2Q9BQI9 281 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 NPFFR1Q9GZQ6 430 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 CHST5Q9GZS9 411 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 COMMD4Q9H0A8 199 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 C19orf12Q9NSK7 152 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 SMPD3Q9NY59 655 aaPredicted RBP7.26□□□□□ -1.25
LDB1-203ENST00000461873 HHLA2Q9UM44 414 aa7.26□□□□□ -1.25
LDB1-203ENST00000461873 LOC100130705A0A1B0GUX0 176 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 SH2D1BO14796 132 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 FADS2O95864 444 aaKnown RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 HCKP08631 526 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 PRKACAP17612 351 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 CCL1P22362 96 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 CAPGP40121 348 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 CEBPDP49716 269 aaPredicted RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 GBX2P52951 348 aaPredicted RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 SNU13P55769 128 aaKnown RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 DLX1P56177 255 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 EFNB1P98172 346 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 MRPL28Q13084 256 aaKnown RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 MED21Q13503 144 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 GRK1Q15835 563 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 FAM189A2Q15884 450 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 TMEM42Q69YG0 159 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 ZNF782Q6ZMW2 699 aaPredicted RBP7.25□□□□□ -1.25
LDB1-203ENST00000461873 SSX6Q7RTT6 188 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 DNAAF1Q8NEP3 725 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 LINC01006Q8NI28 216 aa7.25□□□□□ -1.25
LDB1-203ENST00000461873 HAVCR2Q8TDQ0 301 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms