RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 ZNHIT6Q9NWK9 470 aaKnown RBP2.27□□□□□ -2.05
VBP1-202ENST00000460509 ZNF586Q9NXT0 402 aa2.27□□□□□ -2.05
VBP1-202ENST00000460509 PRO0628Q9UI54 55 aa2.27□□□□□ -2.05
VBP1-202ENST00000460509 CARHSP1Q9Y2V2 147 aaKnown RBP2.27□□□□□ -2.05
VBP1-202ENST00000460509 SHROOM3Q8TF72 1996 aa2.27□□□□□ -2.05
VBP1-202ENST00000460509 LOXHD1Q8IVV2 1947 aa2.27□□□□□ -2.05
VBP1-202ENST00000460509 SVILO95425 2214 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 GOLGA6L4A6NEF3 574 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 SEC14L6B5MCN3 397 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 C4orf51C9J302 202 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 APOA1P02647 267 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 RHOCP08134 193 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 HRES1P13985 223 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 LCN1P31025 176 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 ANP32AP39687 249 aaKnown RBP2.26□□□□□ -2.05
VBP1-202ENST00000460509 KLF3P57682 345 aaPredicted RBP2.26□□□□□ -2.05
VBP1-202ENST00000460509 MEF2CQ06413 473 aaPredicted RBP2.26□□□□□ -2.05
VBP1-202ENST00000460509 STK38Q15208 465 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 ELOCQ15369 112 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 CDNFQ49AH0 187 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 ZNF660Q6AZW8 331 aaPredicted RBP2.26□□□□□ -2.05
VBP1-202ENST00000460509 FAM231DQ6ZW35 169 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 FA2HQ7L5A8 372 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 PAGE2Q7Z2X7 111 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 CYP4Z2PQ8N1L4 340 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 TRIML2Q8N7C3 387 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 CCNYL1Q8N7R7 359 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 OR4K2Q8NGD2 314 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 OR4C13Q8NGP0 309 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 ZFAND1Q8TCF1 268 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 FAM131CQ96AQ9 280 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 FXYD5Q96DB9 178 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 METTL26Q96S19 204 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 PEBP4Q96S96 227 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 COA1Q9GZY4 146 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 SPACA1Q9HBV2 294 aa2.26□□□□□ -2.05
VBP1-202ENST00000460509 RBM22Q9NW64 420 aaKnown RBP eCLIP2.26□□□□□ -2.05
VBP1-202ENST00000460509 C9JQL5 133 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR2A4O95047 310 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 FSTL3O95633 263 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 IGHG2P01859 326 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR5AL1P0C617 328 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 INAFM2P0DMQ5 153 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 PRPS1L1P21108 318 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 SLC6A1P30531 599 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 LDLRAD2Q5SZI1 272 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 KCTD16Q68DU8 428 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 ZFAND6Q6FIF0 208 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 CLEC19AQ6UXS0 136 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 PRNTQ86SH4 94 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 COMTD1Q86VU5 262 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 ST13P4Q8IZP2 240 aaPredicted RBP2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR13C9Q8NGT0 318 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR5H2Q8NGV7 314 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 NT5CQ8TCD5 201 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 CACNG8Q8WXS5 425 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 C22orf15Q8WYQ4 148 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 YIPF5Q969M3 257 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 PPP1R36Q96LQ0 422 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR2M4Q96R27 311 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 OR2A7Q96R45 310 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 CHID1Q9BWS9 393 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 CHRNA10Q9GZZ6 450 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 DSN1Q9H410 356 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 TREM1Q9NP99 234 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 SLC7A11Q9UPY5 501 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 R4GN34 69 aa2.25□□□□□ -2.05
VBP1-202ENST00000460509 SETD1AO15047 1707 aaKnown RBP2.25□□□□□ -2.05
VBP1-202ENST00000460509 TRAV8-7A0A075B6U6 113 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 GMDSO60547 372 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SNRPAP09012 282 aaKnown RBP2.24□□□□□ -2.05
VBP1-202ENST00000460509 LIPCP11150 499 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 CCL2P13500 99 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 ARR3P36575 388 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 C18orf21Q32NC0 220 aaPredicted RBP2.24□□□□□ -2.05
VBP1-202ENST00000460509 C6orf183Q5T699 404 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 PDPK2PQ6A1A2 396 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 CLEC6AQ6EIG7 209 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 USP50Q70EL3 339 aaPredicted RBP2.24□□□□□ -2.05
VBP1-202ENST00000460509 TMEM144Q7Z5S9 345 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SYCE1Q8N0S2 351 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 ZFP62Q8NB50 900 aaPredicted RBP2.24□□□□□ -2.05
VBP1-202ENST00000460509 SUN5Q8TC36 379 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 LRRC20Q8TCA0 184 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 ZNF649Q9BS31 505 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 PRRG3Q9BZD7 231 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 TM6SF2Q9BZW4 377 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SRRQ9GZT4 340 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 RAB1BQ9H0U4 201 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 OR52A5Q9H2C5 316 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SLC38A1Q9H2H9 487 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 FAM60AQ9NP50 221 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 TMEM38BQ9NVV0 291 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 INSIG2Q9Y5U4 225 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 ZNF780BQ9Y6R6 833 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SDK2Q58EX2 2172 aa2.24□□□□□ -2.05
VBP1-202ENST00000460509 SIGLEC1Q9BZZ2 1709 aa2.23□□□□□ -2.05
VBP1-202ENST00000460509 AQRO60306 1485 aaKnown RBP eCLIP2.23□□□□□ -2.05
VBP1-202ENST00000460509 TVP23AA6NH52 213 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms