RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 TRAV6A0A075B6T7 132 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 A0A1B0GTQ1 180 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TMEM120BA0PK00 339 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 A8MUU9 505 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RPL36A-HNRNPH2H7BZ11 118 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TNFRSF11BO00300 401 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TAAR5O14804 337 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RAD1O60671 282 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RBBP9O75884 186 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 SCELO95171 688 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TDP2O95551 362 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 KRT16P08779 473 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 ZNF688P0C7X2 276 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 CELP19835 753 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 ME2P23368 584 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 HTR1DP28221 377 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TAS2R46P59540 309 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RAB11AP62491 216 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 PPIDQ08752 370 aaKnown RBP1.84□□□□□ -2.11
RFC4-211ENST00000460408 PNOCQ13519 176 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RAB11BQ15907 218 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 PRSS8Q16651 343 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 PIP5KL1Q5T9C9 394 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 PLCXD3Q63HM9 321 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 NEGR1Q7Z3B1 354 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TMEM256Q8N2U0 113 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 CSGALNACT2Q8N6G5 542 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 SPANXA2-OT1Q8N9U9 137 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 GATSQ8NAP1 163 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 TTLQ8NG68 377 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 DYNLL2Q96FJ2 89 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 KCNS1Q96KK3 526 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 C18orf15Q96N68 181 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 RNF157Q96PX1 679 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 AGMATQ9BSE5 352 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 ZNF2Q9BSG1 426 aaPredicted RBP1.84□□□□□ -2.11
RFC4-211ENST00000460408 RSG1Q9BU20 258 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 OSBPL11Q9BXB4 747 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 CRLF2Q9HC73 371 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 EXOSC4Q9NPD3 245 aaKnown RBP1.84□□□□□ -2.11
RFC4-211ENST00000460408 PXMP2Q9NR77 195 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 PSME2Q9UL46 239 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 ZNF257Q9Y2Q1 563 aa1.84□□□□□ -2.11
RFC4-211ENST00000460408 ADGRA3Q8IWK6 1321 aa1.84□□□□□ -2.12
RFC4-211ENST00000460408 RAD50Q92878 1312 aa1.84□□□□□ -2.12
RFC4-211ENST00000460408 TANC1Q9C0D5 1861 aa1.84□□□□□ -2.12
RFC4-211ENST00000460408 GREB1Q4ZG55 1949 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 MIA3Q5JRA6 1907 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 SIPA1L3O60292 1781 aaPredicted RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 LRBAP50851 2863 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 NUP214P35658 2090 aaPredicted RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 DOCK2Q92608 1830 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 IGLV2-18A0A075B6J9 118 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 SPAARA0A1B0GVQ0 90 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 OR5H1A6NKK0 313 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 NDUFC2-KCTD14E9PQ53 114 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 XRCC2O43543 280 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 HLA-DQB1P01920 261 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 RAB5AP20339 215 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 PITPNAQ00169 270 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ZNF33AQ06730 810 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 CYP24A1Q07973 514 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ZNF616Q08AN1 781 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 DNAJC3Q13217 504 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 HIKESHIQ53FT3 197 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 CAVIN4Q5BKX8 364 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 TEX30Q5JUR7 227 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 AP1ARQ63HQ0 302 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 APOBEC3HQ6NTF7 200 aaKnown RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 RWDD4Q6NW29 188 aaKnown RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 UNQ9165/PRO28630Q6UXU0 137 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 RTL4Q6ZR62 310 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 OTUD6AQ7L8S5 288 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ZNF547Q8IVP9 402 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 CMTM8Q8IZV2 173 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ZNF645Q8N7E2 425 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 OR4M1Q8NGD0 313 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ITFG1Q8TB96 612 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 TOP1MTQ969P6 601 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ISG20Q96AZ6 181 aaKnown RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 ZNF707Q96C28 371 aaPredicted RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 FAM19A4Q96LR4 140 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 GPR21Q99679 349 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 TBL1YQ9BQ87 522 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 IQCGQ9H095 443 aaKnown RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 TOLLIPQ9H0E2 274 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ING2Q9H160 280 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 PEF1Q9UBV8 284 aaKnown RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 RHBDD3Q9Y3P4 386 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 HIVEP3Q5T1R4 2406 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 NLRC5Q86WI3 1866 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 KIF26AQ9ULI4 1882 aaPredicted RBP1.83□□□□□ -2.12
RFC4-211ENST00000460408 MROH5Q6ZUA9 1318 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 MICAL3Q7RTP6 2002 aa1.83□□□□□ -2.12
RFC4-211ENST00000460408 SDK1Q7Z5N4 2213 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 CENPVL3A0A0U1RRI6 287 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 A0A1B0GUH1 482 aa1.82□□□□□ -2.12
RFC4-211ENST00000460408 VPS37CA5D8V6 355 aaPredicted RBP1.82□□□□□ -2.12
RFC4-211ENST00000460408 CTNSO60931 367 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms