RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ZNF561Q8N587 486 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CT45A3Q8NHU0 189 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ADGRG7Q96K78 797 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ADAM19Q9H013 955 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 FBXL17Q9UF56 701 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ADAM20O43506 726 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ZNF816Q0VGE8 651 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 PTX4Q96A99 478 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 PINX1Q96BK5 328 aaKnown RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 A0A1W2PPC1 479 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 HPP00738 406 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 KRASP01116 189 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 NGFP01138 241 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CCL2P13500 99 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CSF2RBP32927 897 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 FOXL2P58012 376 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CLPPQ16740 277 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 OR5M9Q8NGP3 310 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 SLC35E1Q96K37 410 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 UCN2Q96RP3 112 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 MFRPQ9BY79 579 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 NMES1Q9C002 83 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 TRBV5-5A0A0J9YX44 114 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 A0A1W2PPH5 198 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 CST2P09228 141 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 MGST1P10620 155 aaKnown RBP13.03□□□□□ -0.32
PTPRU-205ENST00000460170 ASCL1P50553 236 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 IL13RA2Q14627 380 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 OSGIN2Q9Y236 505 aa13.03□□□□□ -0.32
PTPRU-205ENST00000460170 B3GALNT1O75752 331 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 MICBQ29980 383 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 SPINK14Q6IE38 97 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 BAGE3Q86Y29 109 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 BAGE2Q86Y30 109 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 CT55Q8WUE5 264 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 CXorf58Q96LI9 332 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 ALX4Q9H161 411 aaPredicted RBP13.02□□□□□ -0.32
PTPRU-205ENST00000460170 SMOC1Q9H4F8 434 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 WDR54Q9H977 334 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 TAAR3PQ9P1P4 343 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 ATP23Q9Y6H3 246 aa13.02□□□□□ -0.32
PTPRU-205ENST00000460170 PDGFBP01127 241 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 TTRP02766 147 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 OR2C3Q8N628 320 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 CPEB3Q8NE35 698 aaKnown RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 CABLES2Q9BTV7 478 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 MRPS18BQ9Y676 258 aaKnown RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 LINC00862A6NCI5 91 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 OR5B21A6NL26 309 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 MASP2O00187 686 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 ABCD4O14678 606 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 ZBTB25P24278 435 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 AKR1C3P42330 323 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 DVL1P1P54792 670 aaPredicted RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 RTL8BQ17RB0 113 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 RPL7L1Q6DKI1 246 aaKnown RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 RAB33BQ9H082 229 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 TO15178 435 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 ENDOGQ14249 297 aaKnown RBP13.02□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF426Q9BUY5 554 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 CA10Q9NS85 328 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 CACFD1Q9UGQ2 172 aa13.02□□□□□ -0.33
PTPRU-205ENST00000460170 PMP22Q01453 160 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 PLPPR5Q32ZL2 321 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 OR5C1Q8NGR4 320 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 RAB40CQ96S21 281 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 DTYMKP23919 212 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 CALCRP30988 508 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 S100A7P31151 101 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 TMEM33P57088 247 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 CXorf67Q86X51 503 aaPredicted RBP13.01□□□□□ -0.33
PTPRU-205ENST00000460170 TVP23CQ96ET8 276 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 AMELYQ99218 206 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 A0A1W2PR80 420 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 TGOLN2O43493 480 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 UPK3AO75631 287 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 LIFP15018 202 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 ZNF250P15622 560 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 ROM1Q03395 351 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 PRR13Q9NZ81 148 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 PSME4Q14997 1843 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 ADAM10O14672 748 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 RRP8O43159 456 aaKnown RBP13.01□□□□□ -0.33
PTPRU-205ENST00000460170 FSTP19883 344 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 CEACAM6P40199 344 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 GABRA4P48169 554 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 WFDC8Q8IUA0 241 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 MPC1Q9Y5U8 109 aa13.01□□□□□ -0.33
PTPRU-205ENST00000460170 FAM24AA6NFZ4 105 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 MGAT2Q10469 447 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 CRIPAKQ8N1N5 446 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 OR4D10Q8NGI6 311 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 GPR137Q96N19 417 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 ZMIZ1Q9ULJ6 1067 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 FAM96BQ9Y3D0 163 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 CTSBP07858 339 aa13□□□□□ -0.33
PTPRU-205ENST00000460170 PNLIPP16233 465 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms