RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 S100A13Q99584 98 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 DNTTIP1Q9H147 329 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 ZNF696Q9H7X3 374 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 HES4Q9HCC6 221 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 SMURF1Q9HCE7 757 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 VCX3AQ9NNX9 186 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 HIF1ANQ9NWT6 349 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 KAAG1Q9UBP8 84 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 CLN8Q9UBY8 286 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 KCNS2Q9ULS6 477 aa9.05□□□□□ -0.96
CCDC12-204ENST00000460035 SF3B6Q9Y3B4 125 aaKnown RBP9.05□□□□□ -0.96
CCDC12-204ENST00000460035 IGKV1D-17A0A075B6S4 117 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 TRAV20A0A0B4J274 112 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 IGKV1-12A0A0C4DH73 117 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 A0A1B0GW55 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 MEGF11A6BM72 1044 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 MAGEA13PA6NCF6 341 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 A8MXK9 166 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 GABRPO00591 440 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DVL1O14640 695 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 NDUFB3O43676 98 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 IGKV1D-12P01611 117 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 UCHL1P09936 223 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L2P0CJ85 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L3P0CJ86 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L4P0CJ87 422 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L5P0CJ88 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L6P0CJ89 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L7P0CJ90 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 PRKACAP17612 351 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 AMY2BP19961 511 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 PTGFRP43088 359 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 OR3A4PP47883 348 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 CAPZA1P52907 286 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DVL1P1P54792 670 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 ZP1P60852 638 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 RSU1Q15404 277 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 WDR25Q64LD2 544 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 STUMQ69YW2 141 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 FAHD2BQ6P2I3 314 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4L9Q6RFH8 374 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 FIP1L1Q6UN15 594 aaKnown RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 TMEM91Q6ZNR0 172 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 ZNF788Q6ZQV5 615 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 SAXO1Q8IYX7 474 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 CD177Q8N6Q3 437 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 FAM216BQ8N7L0 139 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 PNLDC1Q8NA58 520 aaKnown RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 ZSCAN4Q8NAM6 433 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 ANGPTL6Q8NI99 470 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 ST8SIA4Q92187 359 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 PHYHIPQ92561 330 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 FAHD2AQ96GK7 314 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 GAFA1Q96PS6 74 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 NR1H4Q96RI1 486 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 PPIL3Q9H2H8 161 aaKnown RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 EXOSC4Q9NPD3 245 aaKnown RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 RBFOX1Q9NWB1 397 aaKnown RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 CTSZQ9UBR2 303 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 DUX4Q9UBX2 424 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 OR5V1Q9UGF6 321 aa9.04□□□□□ -0.96
CCDC12-204ENST00000460035 POLR3KQ9Y2Y1 108 aaPredicted RBP9.04□□□□□ -0.96
CCDC12-204ENST00000460035 LOC105371242A0A075B767 164 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 TRIM64CA6NLI5 447 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 ARL6IP5O75915 188 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 KDM4BO94953 1096 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CDRT1O95170 752 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 HTR3BO95264 441 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 KNG1P01042 644 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 SFTPBP07988 381 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
CCDC12-204ENST00000460035 DUSP1P28562 367 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CEBPDP49716 269 aaPredicted RBP9.03□□□□□ -0.96
CCDC12-204ENST00000460035 NPY4RP50391 375 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 GP2P55259 537 aaKnown RBP9.03□□□□□ -0.96
CCDC12-204ENST00000460035 IL13RA1P78552 427 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 SCN1BQ07699 218 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 DGUOKQ16854 277 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 LRRC10Q5BKY1 277 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 SYT6Q5T7P8 510 aaPredicted RBP9.03□□□□□ -0.96
CCDC12-204ENST00000460035 DCAF12L2Q5VW00 463 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CD276Q5ZPR3 534 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 GLT8D1Q68CQ7 371 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 ZNF841Q6ZN19 808 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 C1QL2Q7Z5L3 287 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CDH26Q8IXH8 852 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 ZNRF1Q8ND25 227 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 TMEM185AQ8NFB2 350 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 PXT1Q8NFP0 134 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 MUL1Q969V5 352 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 METTL9Q9H1A3 318 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 CNTD2Q9H8S5 307 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 RHOFQ9HBH0 211 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 MMP26Q9NRE1 261 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 GLS2Q9UI32 602 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 ZNF222Q9UK12 451 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 GSTK1Q9Y2Q3 226 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 C2CD3Q4AC94 2353 aa9.03□□□□□ -0.96
CCDC12-204ENST00000460035 SETD2Q9BYW2 2564 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms