RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 IMPAD1Q9NX62 359 aa12.81□□□□□ -0.36
CHCHD3-204ENST00000457942 LOC107986453A0A1B0GWG9 222 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 MEX3AA1L020 520 aaKnown RBP12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 SULT1C4O75897 302 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 POLR2IP36954 125 aaKnown RBP12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 FUT6P51993 359 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 EDDM3AQ14507 147 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 CNN3Q15417 329 aaKnown RBP12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 BEAN1Q3B7T3 259 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 TP53I3Q53FA7 332 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 Q6ZTK2 550 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 EMG1Q92979 244 aaKnown RBP12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 NKX3-1Q99801 234 aaPredicted RBP12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 GABARAPL3Q9BY60 117 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 CHST5Q9GZS9 411 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 HES4Q9HCC6 221 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 S100A14Q9HCY8 104 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 SIGLEC9Q9Y336 463 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 ORC6Q9Y5N6 252 aa12.8□□□□□ -0.36
CHCHD3-204ENST00000457942 EI24O14681 340 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 CYB5AP00167 134 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 ARG1P05089 322 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 CHRM2P08172 466 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 OCM2P0CE71 109 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 OCMP0CE72 109 aaPredicted RBP12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 UBCP0CG48 685 aaKnown RBP12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 POU3F4P49335 361 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 TMED1Q13445 227 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 UBE2V2Q15819 145 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 ZFP1Q6P2D0 407 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 SLC25A26Q70HW3 274 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 CCDC54Q8NEL0 328 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 OR2T6Q8NHC8 308 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 EME1Q96AY2 570 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 NPFFR1Q9GZQ6 430 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 ABCB10Q9NRK6 738 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 FBLN5Q9UBX5 448 aa12.79□□□□□ -0.36
CHCHD3-204ENST00000457942 K7N7A8 449 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 BAG2O95816 211 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 CSF1P09603 554 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 ZNF20P17024 532 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 GABRR1P24046 479 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 ERVK11-1P61568 191 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 DYNC1I2Q13409 638 aaKnown RBP12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 AANATQ16613 207 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 ZIK1Q3SY52 487 aaPredicted RBP12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 Q6ZSR3 168 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 LHFPL4Q7Z7J7 247 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 EGFL6Q8IUX8 553 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 PRSS35Q8N3Z0 413 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 C11orf44Q8N8P7 122 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 OR13D1Q8NGV5 346 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 PPP1R35Q8TAP8 253 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 OSBPL10Q9BXB5 764 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 MEGF9Q9H1U4 602 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 MTCH1Q9NZJ7 389 aa12.78□□□□□ -0.36
CHCHD3-204ENST00000457942 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.36
CHCHD3-204ENST00000457942 IGKV1-27A0A075B6S5 117 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 F8VVB4 439 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 F8VWA3 439 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF728P0DKX0 622 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 ATP1B3P54709 279 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 SNU13P55769 128 aaKnown RBP12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 ACTC1P68032 377 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 ACTA1P68133 377 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 LIAT1Q6ZQX7 453 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 RDH10Q8IZV5 341 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 CBR4Q8N4T8 237 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 C11orf42Q8N5U0 333 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 PP6455Q8WZ26 134 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 AJUBAQ96IF1 538 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF714Q96N38 554 aa12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 RANBP3Q9H6Z4 567 aaPredicted RBP12.77□□□□□ -0.37
CHCHD3-204ENST00000457942 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 ERICH4A6NGS2 130 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 C17orf98A8MV24 154 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 HAND1O96004 215 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 VSIG10L2P0DP72 767 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 KIR3DL2P43630 455 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 RBP2P50120 134 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 ZNF85Q03923 595 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 GRK1Q15835 563 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 ZSCAN26Q16670 478 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 ARSJQ5FYB0 599 aaPredicted RBP12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 TMEM244Q5VVB8 128 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 C11orf88Q6PI97 169 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 TRAPPC6BQ86SZ2 158 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 Q8IYB0 196 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 OR8H2Q8N162 312 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 PQLC1Q8N2U9 271 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 KLHDC1Q8N7A1 406 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 STMN2Q93045 179 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 C10orf35Q96D05 121 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 SNX22Q96L94 193 aa12.76□□□□□ -0.37
CHCHD3-204ENST00000457942 CHST6Q9GZX3 395 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 233.6 ms