RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 C11orf91Q3C1V1 193 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 C8orf59Q8N0T1 100 aaPredicted RBP20.44■□□□□ 0.86
MSH2-203ENST00000454849 PNKDQ8N490 385 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 C8orf46Q8TAG6 207 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 ZFAND2BQ8WV99 257 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 NRG4Q8WWG1 115 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 GATAD2BQ8WXI9 593 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 RGP1Q92546 391 aaPredicted RBP20.44■□□□□ 0.86
MSH2-203ENST00000454849 GCDHQ92947 438 aaPredicted RBP20.44■□□□□ 0.86
MSH2-203ENST00000454849 COMMD4Q9H0A8 199 aa20.44■□□□□ 0.86
MSH2-203ENST00000454849 RBFOX1Q9NWB1 397 aaKnown RBP20.44■□□□□ 0.86
MSH2-203ENST00000454849 CCDC159P0C7I6 412 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 PIPP12273 146 aaPredicted RBP20.43■□□□□ 0.86
MSH2-203ENST00000454849 COL10A1Q03692 680 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 SLC34A1Q06495 639 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 SLC9A3R2Q15599 337 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 TMPRSS11AQ6ZMR5 421 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 CMTM4Q8IZR5 234 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 ZNF561Q8N587 486 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 ASCC1Q8N9N2 400 aaKnown RBP20.43■□□□□ 0.86
MSH2-203ENST00000454849 DNAAF1Q8NEP3 725 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 EMG1Q92979 244 aaKnown RBP20.43■□□□□ 0.86
MSH2-203ENST00000454849 TMEM80Q96HE8 168 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 OPALINQ96PE5 141 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 JAM3Q9BX67 310 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 ZCCHC4Q9H5U6 513 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 DIMT1Q9UNQ2 313 aaKnown RBP20.43■□□□□ 0.86
MSH2-203ENST00000454849 DHDHQ9UQ10 334 aa20.43■□□□□ 0.86
MSH2-203ENST00000454849 CAB39Q9Y376 341 aaPredicted RBP20.43■□□□□ 0.86
MSH2-203ENST00000454849 H0YAE9 185 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 HOXA3O43365 443 aaPredicted RBP20.42■□□□□ 0.86
MSH2-203ENST00000454849 LALBAP00709 142 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 KNG1P01042 644 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 MYL12AP19105 171 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 PRTN3P24158 256 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 ERVFRD-1P60508 538 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 ST3GAL4Q11206 333 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 IL18R1Q13478 541 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 ZFP41Q8N8Y5 198 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 BPIFB6Q8NFQ5 453 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 NKX3-1Q99801 234 aaPredicted RBP20.42■□□□□ 0.86
MSH2-203ENST00000454849 NEK6Q9HC98 313 aa20.42■□□□□ 0.86
MSH2-203ENST00000454849 EXOSC1Q9Y3B2 195 aaKnown RBP20.42■□□□□ 0.86
MSH2-203ENST00000454849 A0A0U1RQK1 487 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 RNASEK-C17orf49H0YIS7 233 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 MRPL28Q13084 256 aaKnown RBP20.41■□□□□ 0.86
MSH2-203ENST00000454849 PDZK1IP1Q13113 114 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 LHFPL2Q6ZUX7 228 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 MKXQ8IYA7 352 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 PIP4P2Q8N4L2 257 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 VCXQ9H320 206 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 BABAM2Q9NXR7 383 aa20.41■□□□□ 0.86
MSH2-203ENST00000454849 IGKV1-12A0A0C4DH73 117 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 IRGMA1A4Y4 181 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 IGKV1D-12P01611 117 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 TK1P04183 234 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 HCKP08631 526 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 RPL31P62899 125 aaKnown RBP20.4■□□□□ 0.86
MSH2-203ENST00000454849 CDK5R1Q15078 307 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 TMEM200BQ69YZ2 307 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 RPL22L1Q6P5R6 122 aaKnown RBP20.4■□□□□ 0.86
MSH2-203ENST00000454849 C12orf54Q6X4T0 127 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 KIR3DL3Q8N743 410 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 OR13C5Q8NGS8 318 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 TFAP2CQ92754 450 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 SPSB1Q96BD6 273 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 CHCHD3Q9NX63 227 aaKnown RBP20.4■□□□□ 0.86
MSH2-203ENST00000454849 HSPE1-MOB4S4R3N1 261 aa20.4■□□□□ 0.86
MSH2-203ENST00000454849 CYB5AP00167 134 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 RPSAP08865 295 aaKnown RBP20.39■□□□□ 0.85
MSH2-203ENST00000454849 PRKACAP17612 351 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 AQP4P55087 323 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 CRIP3Q6Q6R5 217 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 AHSA2Q719I0 299 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 SERPINA12Q8IW75 414 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 FAM58AQ8N1B3 248 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 OR5D14Q8NGL3 314 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 ORAI1Q96D31 301 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 TAS2R4Q9NYW5 299 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 TENM1Q9UKZ4 2725 aa20.39■□□□□ 0.85
MSH2-203ENST00000454849 PNMA8CA0A1B0GUJ8 204 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 TMEM82A0PJX8 343 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 CCL3L1P16619 93 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 SATL1Q86VE3 508 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 PARP16Q8N5Y8 322 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 OR51A2Q8NGJ7 313 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 TNFRSF14Q92956 283 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 CHST6Q9GZX3 395 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 PSORS1C1Q9UIG5 152 aa20.38■□□□□ 0.85
MSH2-203ENST00000454849 TRBV23-1A0A0A0MS06 115 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 EFCAB10A6NFE3 127 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 K7N7A8 449 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 SULT1B1O43704 296 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 HAND1O96004 215 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 MT-ND2P03891 347 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 CHRM2P08172 466 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 TMEM225BP0DP42 221 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 C21orf33P30042 268 aaPredicted RBP20.37■□□□□ 0.85
MSH2-203ENST00000454849 BPIFB3P59826 476 aa20.37■□□□□ 0.85
MSH2-203ENST00000454849 DOC2BQ14184 412 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms