RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 OR2J1Q9GZK6 312 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SLC2A8Q9NY64 477 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 ATPIF1Q9UII2 106 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 COX5BP10606 129 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 TAS2R31P59538 309 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 FOXF2Q12947 444 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 TFAP2EQ6VUC0 442 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 ZNF680Q8NEM1 530 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 WBP1Q96G27 269 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 PRRX2Q99811 253 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SH3BGRL2Q9UJC5 107 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 HS3ST1O14792 307 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 EFSO43281 561 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SYNGR1O43759 233 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 HOXB5P09067 269 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 NBL1P41271 181 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 ABCA11PQ4W5N1 156 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 COLCA1Q6ZS62 124 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 OR1J1Q8NGS3 322 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 TECTBQ96PL2 329 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 TRAF4Q9BUZ4 470 aaPredicted RBP11.76□□□□□ -0.53
CLK3-203ENST00000454830 RDH8Q9NYR8 311 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 IL36RNQ9UBH0 155 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 FZR1Q9UM11 496 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 SHANK1Q9Y566 2161 aa11.76□□□□□ -0.53
CLK3-203ENST00000454830 TPRP12270 2363 aaKnown RBP11.75□□□□□ -0.53
CLK3-203ENST00000454830 OR2A4O95047 310 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 IFNA7P01567 189 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 CXCL2P19875 107 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 ZBTB25P24278 435 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 KRTAP27-1Q3LI81 207 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 ZNF546Q86UE3 836 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 C17orf78Q8N4C9 275 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 RDH5Q92781 318 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 SPSB4Q96A44 273 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 OR2A7Q96R45 310 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 CACNA1DQ01668 2161 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 OR5H14A6NHG9 310 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 FIGNL2A6NMB9 653 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 PDCD6O75340 191 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 FUT3P21217 361 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 RBM11P57052 281 aaKnown RBP11.75□□□□□ -0.53
CLK3-203ENST00000454830 VAX1Q5SQQ9 334 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 TEX261Q6UWH6 196 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 MYPOPQ86VE0 399 aaPredicted RBP11.75□□□□□ -0.53
CLK3-203ENST00000454830 HPSE2Q8WWQ2 592 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 OPN3Q9H1Y3 402 aaPredicted RBP11.75□□□□□ -0.53
CLK3-203ENST00000454830 ANXA10Q9UJ72 324 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 U3KQ87 197 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 ZGRF1Q86YA3 2104 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 F8VVB4 439 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 F8VWA3 439 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 RGS11O94810 467 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 IGHG3P01860 377 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 CHATP28329 748 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 PPP1CBP62140 327 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 CEACAM21Q3KPI0 293 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 TMEM128Q5BJH2 165 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 PXT1Q8NFP0 134 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 GPR137Q96N19 417 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 C5orf66Q9H5L9 145 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 FN3KRPQ9HA64 309 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 ZNF286AQ9HBT8 521 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 GLRX2Q9NS18 164 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 CLCF1Q9UBD9 225 aa11.75□□□□□ -0.53
CLK3-203ENST00000454830 ARHGAP21Q5T5U3 1957 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 G3V3Q6 166 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 GRPP07492 148 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 ZNF44P15621 663 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 SERPINF1P36955 418 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 RBMXP38159 391 aaKnown RBP11.74□□□□□ -0.53
CLK3-203ENST00000454830 GSG1LQ6UXU4 331 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 Q6ZSR3 168 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 PPP1R1CQ8WVI7 109 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 EXTL1Q92935 676 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 AQP7O14520 342 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 BET1O15155 118 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 SS18L1O75177 396 aaPredicted RBP11.74□□□□□ -0.53
CLK3-203ENST00000454830 ADAP1O75689 374 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 GLP1RP43220 463 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 PHLDA2Q53GA4 152 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 ZBTB37Q5TC79 503 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 THAP6Q8TBB0 222 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 OBP2BQ9NPH6 170 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 PROCRQ9UNN8 238 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 MCRIP1C9JLW8 97 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 FPR2P25090 351 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 HERV-K104P61576 105 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 EXOSC2Q13868 293 aaKnown RBP11.74□□□□□ -0.53
CLK3-203ENST00000454830 COQ8AQ8NI60 647 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 HS3ST6Q96QI5 342 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 NECAP2Q9NVZ3 263 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 LHX6Q9UPM6 363 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 MAB21L2Q9Y586 359 aa11.74□□□□□ -0.53
CLK3-203ENST00000454830 A6NLC8 198 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 RP2O75695 350 aa11.73□□□□□ -0.53
CLK3-203ENST00000454830 SPDEFO95238 335 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms