RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 NKX6-3A6NJ46 265 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 J3QLI3 93 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 SIGLEC5O15389 551 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 SC5DO75845 299 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 KNG1P01042 644 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 IGKV1D-12P01611 117 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 MAPK3P27361 379 aaPredicted RBP23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 BDKRB2P30411 391 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 GABRA2P47869 451 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 NPBWR2P48146 333 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 C11orf91Q3C1V1 193 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 PHC2Q8IXK0 858 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 ZSCAN4Q8NAM6 433 aaPredicted RBP23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 OR5D18Q8NGL1 313 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 RAB40AQ8WXH6 277 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 CPNE2Q96FN4 548 aaPredicted RBP23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 SDSLQ96GA7 329 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 TMPRSS13Q9BYE2 586 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 SHARPINQ9H0F6 387 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 NOX4Q9NPH5 578 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 LPAR3Q9UBY5 353 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 INSIG2Q9Y5U4 225 aa23.23■■□□□ 1.31
SMARCC1-203ENST00000454240 LOC105371242A0A075B767 164 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 ANGPTL7O43827 346 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 BCL3P20749 454 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 PRDX2P32119 198 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 IL13RA1P78552 427 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 INSL4Q14641 139 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 DGUOKQ16854 277 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 KCTD21Q4G0X4 260 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 CD276Q5ZPR3 534 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 CD177Q8N6Q3 437 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 SF3B6Q9Y3B4 125 aaKnown RBP23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 MAB21L2Q9Y586 359 aa23.22■■□□□ 1.31
SMARCC1-203ENST00000454240 SETD2Q9BYW2 2564 aaPredicted RBP23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 IGHV2-70DA0A0C4DH43 119 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 C22orf46C9J442 243 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 NDUFB3O43676 98 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 KDM4BO94953 1096 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 SELLP14151 372 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 IKZF1Q13422 519 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 ZNF773Q6PK81 442 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 SATL1Q86VE3 508 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 FGFRL1Q8N441 504 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 RHOFQ9HBH0 211 aa23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 RBFOX1Q9NWB1 397 aaKnown RBP23.21■■□□□ 1.31
SMARCC1-203ENST00000454240 KIR2DS1A0A191URI9 304 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 GABRPO00591 440 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 GPR37O15354 613 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 AVPP01185 164 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 TMEM225BP0DP42 221 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 HOXB4P17483 251 aaPredicted RBP23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 GP2P55259 537 aaKnown RBP23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 TRAM1Q15629 374 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 CHRFAM7AQ494W8 412 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 LRRC10Q5BKY1 277 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 DDI2Q5TDH0 399 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 UBE2UQ5VVX9 321 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 C1orf229Q6ZS94 237 aaPredicted RBP23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 FAM58AQ8N1B3 248 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 PXT1Q8NFP0 134 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 ST8SIA4Q92187 359 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 EMG1Q92979 244 aaKnown RBP23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 TMEM203Q969S6 136 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 GPER1Q99527 375 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 BEX2Q9BXY8 128 aa23.2■■□□□ 1.3
SMARCC1-203ENST00000454240 MAGEA13PA6NCF6 341 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 ECDO95905 644 aaPredicted RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 HNF1AP20823 631 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 ZNF93P35789 620 aaPredicted RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 CEBPDP49716 269 aaPredicted RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 RPS25P62851 125 aaKnown RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 PAX8Q06710 450 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 ARMCX4Q5H9R4 360 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 IL17RELQ6ZVW7 336 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 BTN2A1Q7KYR7 527 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 C1QL2Q7Z5L3 287 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 CEACAM19Q7Z692 300 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 ZNRF1Q8ND25 227 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 NUDT16L1Q9BRJ7 211 aaKnown RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 C7orf69Q9H7B7 122 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 SEBOXQ9HB31 216 aaPredicted RBP23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 HMG20AQ9NP66 347 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 OR14J1Q9UGF5 321 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 OPN4Q9UHM6 478 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 METRNQ9UJH8 293 aa23.19■■□□□ 1.3
SMARCC1-203ENST00000454240 SFTPBP07988 381 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 PSMA1P25786 263 aaKnown RBP23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 CAV3P56539 151 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 SSX1Q16384 188 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 FAM27D1Q5T7N8 215 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 ASCL4Q6XD76 172 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 TMEM91Q6ZNR0 172 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 ZNF561Q8N587 486 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 FCGR1BQ92637 280 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 IL36RNQ9UBH0 155 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 SLC25A10Q9UBX3 287 aaPredicted RBP23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 NF1P21359 2839 aa23.18■■□□□ 1.3
SMARCC1-203ENST00000454240 PTGFRP43088 359 aa23.17■■□□□ 1.3
SMARCC1-203ENST00000454240 ZNF146Q15072 292 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms